Microplitis demolitor: 106693948
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Entry
106693948 CDS
T05600
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
mdl
Microplitis demolitor
Pathway
mdl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106693948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdl03400
]
106693948
DNA repair and recombination proteins [BR:
mdl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106693948
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Adenylsucc_synt
CbiK
PilJ
Motif
Other DBs
NCBI-GeneID:
106693948
NCBI-ProteinID:
XP_014299096
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MSKRSLRSNTLSDELKSSKTSKKDEKKTSKVASRPKPATPKRTTTKTKAKPEPQPKAKSK
KTDVNGKENKGESTSSKRKRQVKEKPKIEDNSDDEEKDEETPVKRKRRKIIVPSDESGDD
SDEYKPSDDEASDSDASISSAAASSEVDTSLDTATDDDPTPKKERKPRNPGKDKKFNPNQ
KKTQKDDDEPGKSFQLAKAKLPSGPVSGAESWPHLKYSFLQPDKIQDAENRRPDDPEYDA
KTLYVPQEFLDEQTPSMRQWWVLKSQHWDCVFFHKIGKFYGLYHMDAVIGANALGLSIIP
RDFAYTGCFEVNFSRYFKTLVEKGYKVARIEQTENPEMMAERCKNSKTKASKFDKVVRRE
VCQVTTRGTRVPTVLDIENFSAHSNYLLSLVEQQNSAHLSTYGICFIDTSIGVFHIGQFE
DDCNNSRLLTLLSHYIPVHIIYGKGNLSAKTIKIINTHLPVTTIKEPLLHSQFWTATKVL
EKLYEGEYFKDESNEFSWPDGLKPFLNDQGTNGFSPAKDKTLAVHALGGCVYLLTESVLD
HQLLAQKKFETYIPPDMNVVNGQRVGPLVNMVIDAATIENLNILGSSPSLLTSLDHCNTD
FGKRLLKEWVCRPPCDKNTIIARQDAVTELRDLKRICQEASKQLNNLPDFERLLSKIHAH
GNAAKMKNHPDARAFMCEMMTYNQRKITDLINCLKGFNQVLEILKIFDSLVSDLIVQTTK
IEPKGEFPDIKKTLNQFERRFDSNLALKQGCIIPKKGMDPEYDEVIAELEQIKKDMDVYL
KSQSKYFGTEITFTGGRENAYQIEIPDSVVDKVTDHYEYQGKRKGFKRYLTEETKKFHER
QTKAEEQHEKVLKDSDRRTFAKFSEHYDMWATAVYKVAVLDVLISLAEYSRRGDKCVPEI
NDIDEVMIDIKNGIHPLITSDNFVPNDTSLASNGYGPLVILTGPNMGGKSTIMRQVGLLS
IMAHIGCHIPAQSCKFSLIDRVFTRLGANDDMITGRSTFLVELSEASTFVLHATKNSLVL
VDELGRGTSTHDGTAIAAAVLQALARLECRTLFSTHYHALLDDFKDNPKVSPAHMACQVE
SEESDATQETVTFLYKFTKGPCPKSYGFNAARIAGIKANITKRANDLAKKLEDAGNRRSL
FMSLCKVNNHNVKRILTQLHAIAVK
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacgtagtttacgatcaaatactctgtctgatgaattaaagtcatctaaaaca
tcgaaaaaggatgaaaagaaaactagtaaagttgcatcgcgtccaaagccagcaacacct
aaacgaacaacaaccaaaaccaaagctaaacctgagcctcaacctaaagctaaatctaaa
aaaactgatgtcaatgggaaagagaacaaaggagagtccaccagttctaaaagaaagcga
caagttaaggaaaaaccaaaaatcgaagataattcagatgatgaagaaaaggatgaggag
actccggtaaaaaggaagagaaggaaaataattgtcccctctgatgaaagtggagatgat
tcagatgaatacaaaccaagtgatgatgaagcttcagactcagatgcctcaatatcgtca
gcagctgctagttctgaagtagacacttcgttagatactgcgactgatgatgacccaaca
cctaaaaaagaacggaaaccaagaaatcctggtaaagataaaaagtttaatccaaaccaa
aagaaaactcagaaggatgatgatgaacccggcaagtcatttcaattggcaaaagcaaaa
ttaccatcaggtccagtttccggtgctgaaagttggcctcacttgaaatattcatttctt
cagcccgataaaattcaagatgctgaaaatagaagacctgatgatccagaatatgatgct
aaaacactctacgtaccccaagaatttcttgatgaacaaactccatcgatgcgtcagtgg
tgggtactcaaaagtcaacattgggactgtgttttcttccataaaattggtaaattttat
ggattgtatcatatggatgctgtcattggagctaatgcacttggtttgtcaattataccc
cgtgattttgcatacacgggatgctttgaagtaaactttagtcgttattttaaaactctt
gttgaaaaaggatacaaagtagctcgtatagagcaaactgaaaatccagaaatgatggct
gaacgttgtaaaaattcgaaaacaaaagcgtcgaaatttgataaagttgttagacgtgaa
gtttgccaagttactactcgaggtacccgagttcctacggtgttagatattgaaaatttt
tcagctcattctaactatttattatcgttggttgaacaacaaaattcagctcatttatca
acttacggaatttgttttattgatacaagtattggagtttttcatataggtcagtttgaa
gacgattgtaacaattcacgtctacttacgttgttatctcattacatccctgtccacatt
atatacggaaaaggaaatctctctgcaaaaacaataaaaataatcaatactcatctgcca
gtaacaacaatcaaagaacctttacttcattcgcaattttggacggcgacaaaagttctt
gagaaactttatgaaggggaatattttaaagacgagtcaaatgaattttcttggcccgat
gggttgaagcctttcctgaacgatcaaggtactaacggttttagtccagctaaagataaa
acattagcagttcatgcactcggtggatgtgtttatttattaactgaatctgtgttagat
catcaactactagcgcagaagaaatttgagacatatatacctccagatatgaatgtagtt
aatggacaacgagttggaccgcttgtcaatatggtaattgatgccgctactatagaaaat
ttgaatattcttggtagtagtccgtcacttttaacttccttagatcactgcaacacagat
tttggtaagcggttattgaaagaatgggtttgtcgaccaccttgtgacaaaaatactatt
atagctcgtcaagatgctgtcacagagttacgtgatttgaagcgcatatgtcaggaagca
agtaaacagttaaacaaccttccagattttgaaaggttattaagtaaaattcatgctcat
ggaaatgctgctaagatgaaaaatcatcccgatgctcgagcatttatgtgcgaaatgatg
acttacaatcaacggaaaattactgacttaattaactgtctaaaaggctttaatcaagta
cttgaaatacttaaaatttttgattcattagtaagtgacttgatagtacaaacaacaaaa
attgagccgaaaggagagtttcccgatataaagaaaactcttaatcaatttgaacgtagg
tttgattcaaatttagcactcaaacaaggatgtataataccaaaaaaaggaatggatcct
gaatatgatgaggtaatcgctgaattagaacaaataaaaaaagatatggacgtgtatttg
aagtctcaaagtaaatattttggaacggagattacctttactggaggtcgtgaaaacgct
tatcaaatagaaataccagacagtgtagtggataaggttactgatcattatgaatatcaa
ggtaaacgtaaaggttttaaacgttatttaacggaagaaacaaaaaaatttcatgaacga
caaacaaaagctgaagaacaacatgaaaaagtgcttaaagactctgataggcgtaccttt
gcaaagttcagtgagcactatgacatgtgggctacagctgtttacaaagttgctgttctc
gatgttcttatttcacttgctgaatactccagaagaggtgataagtgtgttccagaaatt
aatgatatagatgaagtaatgatcgatattaaaaatggaatacatcctttaatcacctca
gataatttcgtccccaatgacacatcacttgcgagcaatggctatggtcctttggttatt
ctaactggaccgaatatgggtggaaaatcaacaattatgcgtcaagtaggtttattgagt
attatggcacatatcggatgccatataccggcacagagttgtaagttttcattgatagat
cgtgtattcactagactgggtgccaatgatgatatgataactggtagaagtacattcctc
gttgaattaagtgaagcgtccacatttgttcttcatgctactaaaaattctctcgtactt
gttgatgaacttggtcggggtacatcaacccatgatggtacagctatagccgcagctgtt
ctccaagctcttgctaggcttgaatgccggactttattctctacacattaccatgcactc
ctcgatgactttaaagacaatccaaaagtttcaccagctcatatggcttgtcaagttgag
agtgaggaaagtgacgctacccaagaaacggttacttttttgtacaaattcactaaggga
ccttgtccaaaatcatatggatttaatgctgcacgcattgctggcataaaagccaatatt
acaaaacgagccaatgatcttgcgaaaaaactcgaagatgccggtaatcgaagaagttta
ttcatgtccttatgtaaggttaacaatcataatgtaaaaaggatacttacacagctgcac
gctattgctgtcaaataa
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