KEGG   Malus domestica (apple): 103403551
Entry
103403551         CDS       T03194                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9B
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
mdm  Malus domestica (apple)
Pathway
mdm03020  RNA polymerase
mdm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103403551
  09124 Replication and repair
   03420 Nucleotide excision repair
    103403551
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103403551
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103403551
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     103403551
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103403551
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C zinc_ribbon_4
Other DBs
NCBI-GeneID: 103403551
NCBI-ProteinID: XP_008340615
LinkDB
Position
16:complement(12576483..12579079)
AA seq 114 aa
MSTMKFCRECNNILYPKEDKEHKILLYACRNCDHQEVAENNCVYRNEIHHPVGEHTQILQ
DVAADPTLPRTKAVRCAKCEHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtaccatgaaattttgccgcgaatgtaacaacattctgtacccgaaggaggacaag
gagcataagattctcctctacgcctgccgcaactgcgatcaccaggaggttgctgagaac
aactgtgtctatagaaatgagatacaccaccccgttggcgagcacactcagatattgcag
gatgtagcggcagatcctactcttcctcgaactaaagccgtgcgttgtgcaaagtgcgaa
catggagaagctgtattctttcaggcaactgctagaggagaggagggtatgacattgttc
tttgtttgctgcaaccccaactgcggccacaggtggcgagactaa

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