Malus domestica (apple): 103431306
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Entry
103431306 CDS
T03194
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
mdm
Malus domestica (apple)
Pathway
mdm03020
RNA polymerase
mdm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103431306
09124 Replication and repair
03420 Nucleotide excision repair
103431306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103431306
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103431306
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103431306
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103431306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Pro_Al_protease
Motif
Other DBs
NCBI-GeneID:
103431306
NCBI-ProteinID:
XP_008367672
LinkDB
All DBs
Position
10:complement(15133144..15136419)
Genome browser
AA seq
318 aa
AA seq
DB search
MEGKSYQRLPRVKIREMRDDYLKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSS
VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV
TSKDLLSSDHTVVPVDFSDSSGFESSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKWS
PAATVTFMYEPDIRINEELMDTLTLEEKKAWVESSPTKVFDIDPKTDKVVVVDPEAYTYD
DEVIKKAEAMGKSGLVDITAREDSFIFTVESTGAIKAAQLLLNAIEVLKQKLDAVRLSED
TVEADDQFGELGAHMRGG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtaaatcgtaccagagactcccgcgcgtcaaaatccgcgaaatgcgtgacgac
tacttgaagttcgagctccgcgacaccgacgccagcgtcgccaacgcgctccggcgcgtg
atgatcgccgaggtccccactgtcgccatcgatcttgtcgagatcgagatcaactcctcc
gtcctcaacgacgagttcatcgcccaccgactcggtctcatccccctcacctccgaccgg
gccatgagcatgcgcttctcacgtgactgcgacgcctgcgacggtgacggacagtgcgag
ttctgctccgtcgagtttcacctccgcgccaagtgccactccgaccaaaccctagatgtc
accagcaaggacctcctcagctccgaccacaccgtggtccccgttgatttctctgattcc
tccggcttcgaatcctccgaacagaagggaattataattgtgaagttgcgaagggggcaa
gagctgaggctgagggccattgccagaaaggggattggcaaagatcatgctaagtggtcg
cccgcggccactgtcactttcatgtatgaacccgacattcgaatcaatgaggagctgatg
gatactttgactcttgaggagaagaaggcttgggttgagagtagtcccaccaaggtcttt
gacattgatcctaaaaccgacaaggtcgtggtggttgatcctgaagcatacacctatgat
gatgaagtgatcaagaaagcagaagctatggggaagtctgggcttgtggatatcactgca
agagaagatagctttatattcacagtggaatctaccggtgcgattaaagctgctcagttg
ctccttaatgctatagaagtcctgaaacagaagctggatgcagtgcgcctttctgaggat
actgtagaagcagatgaccagtttggtgaattaggtgcacatatgcgaggaggatga
DBGET
integrated database retrieval system
