Malus domestica (apple): 103443311
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Entry
103443311 CDS
T03194
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit 1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103443311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103443311
Enzymes [BR:
mdm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103443311
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
103443311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
103443311
NCBI-ProteinID:
XP_008380348
LinkDB
All DBs
Position
9:complement(12516447..12521086)
Genome browser
AA seq
1396 aa
AA seq
DB search
MKSANVKTLDFTRQPFIEPDTHRTVKELKFTVMSPAEIMKLAEVQIYIGAYYNSGWKPIE
GGLLDPRLGPASKRLICATCGGNHVECPGHFGYLALALPVYNVGYLGTVVNVLKCICKNC
SGFLLKDEMRVEYLRKMRNLKDPMKKIELMKIVVKKCTALCAGNRRAECWKCGYVNGTVK
KAVGMIGILHDRSKFEDVMDELRKTMAETKVSAAGLSVEAMLDPAKVFTLLKEMSDEDCE
VLYLSTRPENLLITNILVPPTVIRPSVLVGGEVSNENDITVRLKQIIQSNARLTRDLFDL
RLGYAPGVKRSWDELQVEVAQYINSEVRVPFTMQGGNPLNGFVQRLKGKQGRFRGNLSAK
RVEYTGRSVISPDPNLKINEVGVPIEMAQILTYPERVTCHNIEKLRKCVSNGPHKYPGAR
SLHRDGEEFSLAITRISKNLADGLQYGDIVGRHLQDGDILLFNRQPSLHRMSFMSHRAKV
MPWRTLRFNESVCNPYNADFDGDEMNIHVPQTEEARAEAALLLGVENNLYTPKNGEILVA
STQDFLTSSFLITRKDTFYDRSSFSLMCSYMGSGMDPVDLPTPAVIKPVELWTGKQLFSV
LVRPNANVRVYLNLTVTEKSYTSTKTEDGREIEAMCPNDGFVYFRNSVLIAGQLGKATLG
NGNKNGLYSVLLRDYKPHAAAACMNRLAKLSAQWIGNHGFSIGISDVQPSGNLREEKEKI
IKEGYEKCYGQIKLFNEGQLQLIPGSDAAQSLESGITSVLNNIRDQTGKLCMQKLHWRNS
PLIMSQCGSKGSAINISQMVACVGQQSVGGCRAPNGFIDRSLPHFPRGVKTPAAKGFVAS
SFYSGLSPTEFFFHTMGGREGLVDTAVKTADTGYLSRRLTKVMEDLCVQYDKTVRNASGC
ILQFCYGDDGMDPAVMEGKDGAPLDLPRLFLKAKATCPAGKNEYVSPDQVSEIVRRRLSE
PDMTPEAGCSAGFKTSLEEFLDEYVESFRKKHEIFMFDDDQIPAWKEKIVQNIAGVTSRQ
LEVFLDTCISRYHSKKIEGGTAIGIIGAQSICEPATQMTLKTFHFAGVASMNITLGVPRI
KEILDAVKNIHTPIITAALECDTNEKSARVVAGRIERTSLGQIAESIQIVMTARSASIVI
TLDMSMIQDARLSVDANVVKESILQIRGIXLKSENIKVLDVRKLEVFPVETDRNKLYFRL
HSLKNMLPSITVRGINTVKRVINNEKEAKTNHKKYKLFAEGRGLLEVLGTEGVDGCRTTS
NDVLEVQRTLGIEAARVCIIEEIKSTMKQHGMNIDCRHMICVGDVMTYMGEVLGLTRFGA
KKMEKSVIALASFEQVADHLFNGCVNGRVDAVRGVSECIIMGVPIRVGTGMFNIREGGFS
GSGAHDSNVELHYGPG
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgccaacgtcaaaaccctagatttcaccaggcagccctttatcgagcccgat
acgcaccgtacggtaaaggaactgaaatttaccgttatgtccccggcggagattatgaaa
ctggcggaagttcaaatctacattggcgcgtattacaattccggttggaaacccatcgaa
ggcggcttactggacccgcggctcggcccggcgagcaagcggttaatctgcgccacttgt
ggcgggaaccacgtcgagtgcccggggcattttgggtatttggccctcgcactccccgtc
tacaacgtcgggtatctgggcacggttgtgaacgtcctgaagtgcatctgcaagaattgt
tctgggtttctactgaaggacgaaatgcgggtggagtatttgaggaagatgaggaatctg
aaggatcctatgaaaaaaatcgaactgatgaaaattgtggtgaagaaatgtactgcattg
tgtgccggtaatcggcgggcggagtgctggaaatgcgggtatgtgaacgggacggtgaag
aaggcggttgggatgatcggtattcttcacgaccgttcgaaatttgaagatgtgatggat
gagttgagaaaaacaatggcggagactaaagtctccgcagcggggttgagcgtggaagct
atgttagaccccgcaaaagttttcactttgttgaaagagatgagcgatgaggattgtgag
gtgctttatttgtctactagaccggagaatctcttgataaccaacattctggtgccgcct
actgtgattcgcccttcggttttggttgggggagaagtgagcaacgagaatgacattacg
gtgaggttgaagcagatcattcagtcgaatgcgcgccttacgcgcgatttgtttgatttg
aggctggggtatgcccccggggttaagcggagttgggatgaacttcaggttgaggttgcg
cagtacataaatagtgaggttcgtgtgcctttcacaatgcaaggtgggaatccgttgaac
ggttttgtgcagcggctcaaggggaagcaagggcgttttcgcgggaatttgtctgcgaaa
cgtgtggaatatactggaagaagtgttatatctcctgaccctaatctgaaaatcaatgag
gttggagtccccattgaaatggctcaaatcttaacgtaccccgaacgggttacatgtcat
aatattgagaagttgaggaagtgtgtgagtaatggacctcataagtaccccggtgccaga
tccttacatcgtgatggtgaagaattctccttggcgattacgaggatcagtaaaaatctg
gctgatggactccaatacggtgacatagttggacgccatctacaagacggtgacattctt
cttttcaacagacaaccaagcttgcataggatgtctttcatgtctcatcgggctaaggtt
atgccttggaggacgctgaggtttaatgaatctgtttgcaatccgtataatgctgatttt
gacggcgatgagatgaacattcatgtcccgcaaacagaggaggcgcgggcagaggctgct
ttgttgttaggggtggaaaacaatttgtacacacccaaaaatggggagatcttggttgct
tcaactcaagattttctgacatcctctttccttataacgaggaaggacacattttatgac
cgttcatcattttcactcatgtgttcatatatgggaagtggcatggatccagttgatctt
ccaacacctgccgtgattaaaccagtagagctgtggacaggaaagcaattgtttagtgtt
ctcgtacgcccaaatgcaaatgtgagagtctatctgaatctaactgtcacggagaagtcc
tacaccagcaccaagaccgaagatgggagagaaattgaagcaatgtgcccgaatgatggg
tttgtctattttcgtaacagtgtgctcatagccgggcaacttgggaaggctacattggga
aatggcaacaagaatggactttactctgttcttctcagagactataaacctcacgcagct
gctgcttgcatgaatcgcttagctaagttaagcgcacaatggattggtaaccacggattc
tcaattgggataagcgatgttcagccaagtggcaatttgcgcgaagagaaagagaagata
attaaagaaggctatgaaaaatgttatggccagataaagttgtttaatgaagggcagctc
caacttataccgggttctgatgcagcacagtcgcttgagtcggggataactagtgtattg
aacaacatcagagatcaaaccggaaagttgtgtatgcaaaagctgcattggagaaatagt
cccttgatcatgtcccagtgtggttctaaaggatctgccatcaatatcagccagatggtt
gcttgtgttggccagcaatcggttggtggttgtcgtgcccccaacgggttcatagaccga
agccttccacacttccctagaggtgtaaaaacccctgccgctaaagggtttgttgctagc
tcattttacagcggcttgagtcctacagagtttttcttccatacaatgggagggcgagag
gggcttgtggatacagctgtgaaaacagctgacactgggtacctgagtcgtagattgacc
aaagttatggaggatctgtgtgttcagtatgataaaaccgtgagaaatgcgagtggatgt
atacttcagttctgttatggagatgatgggatggatcctgcagtgatggaaggaaaagat
ggagctccgttggacttgccccggttgtttctgaaagcgaaagccacatgtcctgccggc
aaaaatgagtacgtgtctcctgatcaagtgtctgaaatagtgagaagaaggctttctgaa
ccagatatgactcctgaggccgggtgctctgccggtttcaaaacttctttggaagaattt
ttggatgagtatgtagaatcattcagaaaaaaacatgagatatttatgtttgatgatgat
caaatccctgcttggaaggagaagattgtgcaaaatatcgcgggtgttacttctagacag
ttggaggtttttcttgatacttgcatttcacgttaccattcgaagaagattgaaggtgga
acagcaattggaataatcggagctcaaagtatttgcgagcctgcgacgcagatgacactg
aaaactttccactttgctggagttgcaagcatgaacattacactcggagtcccccgaatc
aaggaaatattagacgcggtgaagaacatccacacgccaatcatcactgcggcactcgaa
tgtgatactaacgaaaaatctgcaagggtggtagcagggcggattgagagaacaagtctc
gggcagattgctgagagtatacagattgtgatgactgcaagatcagcatctatagtgatc
acgctcgatatgtccatgattcaagatgcgcgcttgtccgtggatgccaatgtggtgaaa
gaatcgattttacaaattcggggaatcnaactaaagtcagaaaatatcaaggttttggat
gtcagaaaattggaagtttttcctgtagagactgacaggaacaaactttattttcgcctt
cacagcttgaaaaacatgctcccatcaatcacagtaaggggcataaacacagtcaagcgt
gtgattaacaacgaaaaagaagcgaaaacaaatcacaagaagtacaagctgttcgccgaa
ggcagagggcttctagaagtgctggggactgaaggagtagacggatgcagaaccacaagc
aatgacgttctggaagtgcagaggacgcttgggatcgaagcggcgcgagtctgcatcatt
gaggagataaagagcacgatgaaacaacatgggatgaacatagactgccggcacatgatc
tgcgtgggggatgtgatgacatacatgggggaagtgcttgggctgacgcgatttggagcg
aagaaaatggagaagagtgtgattgcattggcgtcgttcgagcaggtggcggatcatctg
ttcaatggctgtgtgaatgggagagttgacgcggttagaggagtgagtgagtgcataatt
atgggtgtgccaattcgggttgggactggaatgttcaacattagagagggaggattttct
ggttcgggagctcatgattcaaatgtcgaactgcactatgggccaggctag
DBGET
integrated database retrieval system
