Malus domestica (apple): 103444350
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Entry
103444350 CDS
T03194
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 7, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00900
Terpenoid backbone biosynthesis
mdm01100
Metabolic pathways
mdm01110
Biosynthesis of secondary metabolites
Module
mdm_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
103444350
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mdm01006
]
103444350
Enzymes [BR:
mdm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
103444350
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
103444350
2.5.1.29 geranylgeranyl diphosphate synthase
103444350
Prenyltransferases [BR:
mdm01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
103444350
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Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
103444350
NCBI-ProteinID:
XP_008381504
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All DBs
Position
9:33806802..33808039
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AA seq
388 aa
AA seq
DB search
MHSPKNLIPTSKEFMASFATILSYETPSLLKTAANFGRLNEILNGSTRTSSTALIRMKIK
ATATRVTDSASAFQPLLVDGEPIAKPLETTQFPVFKFDEYMSTKAKMVDKALNEAVPLQY
PKKIHRAMRYSLLAGGKRVRPVLCLASCELVGGDESLAIPVACAVEMIHTMSLIHDDLPC
MDNDDLRRGKPTNHKAFGEETAVLAGDALLSLAFEHVAAKTTKVVSPERVVRAITELGSA
VGSLGLVAGQMVDIQSEGKEVTLRELEYIHVHKTAKLLEASVVCGAIIGGAGEGEVERMR
KYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKATYPKLMGIEGAKNFAAELVAQ
AVQELAHFDAARAAPLYYLANFIANRQT
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcattcacccaaaaatttgataccaacaagcaaggaatttatggcttcttttgcaact
atcctaagctatgaaactccatcccttctcaaaaccgctgctaattttggtcgtctcaac
gaaattctgaatggcagcactagaacctcatcaactgctctcattcgcatgaagataaag
gccacagctacacgagttactgactcagcgtctgcattccaaccattgctcgtcgatgga
gaaccaatcgccaaaccactcgaaaccacccagtttccggtgttcaaattcgatgagtac
atgtcaacgaaggcaaagatggtggacaaggcgttgaacgaggccgtgcctttgcagtac
cccaagaaaatccatagggcaatgaggtactcgcttttggctggcggaaagcgcgtgcgg
ccggttttgtgtctcgcttcatgtgaattagttggaggggatgagtcacttgcaatccca
gtagcttgtgccgttgaaatgatccacaccatgtcgcttattcacgatgatctcccttgc
atggacaacgacgatcttcgtcgcgggaagcctaccaaccacaaggcttttggggaggaa
accgcggttctagccggtgatgcgcttctttcccttgcctttgaacatgtagcggccaag
acaacaaaagtagtatcgccggagcgtgtggttcgagccatcaccgagcttggttcggcc
gtcggatcattaggcctcgtggcgggtcaaatggtggacattcaaagcgaaggcaaagaa
gtgacgctgcgagaactcgagtacattcacgtgcataagaccgcgaagctcctcgaggca
tcggtggtttgcggggcaatcatcggaggagcaggtgaaggggaggtggagaggatgagg
aagtatgcaaggtgtataggtttgttgtttcaagtggtggacgacattttggacgtgacg
aaatcgtcagaggaattggggaagacggccgggaaagatttggcaagcgataaggcgaca
tatccaaagctgatgggtattgaaggggcaaagaattttgctgccgagttggtggcgcaa
gcagtgcaagagcttgctcatttcgatgctgctagggcggctccattgtattatttagcc
aattttattgccaatagacagacatag
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