Malus domestica (apple): 103450601
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Entry
103450601 CDS
T03194
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00906
Carotenoid biosynthesis
mdm01100
Metabolic pathways
mdm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
103450601
Enzymes [BR:
mdm01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
103450601
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Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
GIDA
FAD_binding_2
HI0933_like
Thi4
FAD_oxidored
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
103450601
NCBI-ProteinID:
XP_008388192
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Position
2:6514655..6518408
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AA seq
532 aa
AA seq
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MDCVAAMTASFCPTWRARRRGGLAGGKEGPFFRYGLCNKVSLLRVRASAGGEGGGVGVAV
KEGFADEEDFMKGGGPELLLVQMQQKKVMEKQSKLAEKLLPIPVGDSVLDLVVIGCGPAG
LALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFKDLGLEGCIEHVWQNTIVYLDGDSDP
IMIDRAYGRVCRDMLHEELLRKCVESGVSYLDSRVESIVEASNGISLVSCGHNIVVSCRL
ATVASGAASGKLLQYEVGGPKVSVQTAYGIEVEVESNPYDPEVMVFMDYRDYMKQKVRSS
EAEYPTFLYVMPMSPTRLFFEETCLASKEAMPFDLLKKKLLSRLQTMGIRITKTYEEEWS
WIPVGGSLPNTEQKNLAFGAAACMVHPATGYSVARSLSEAPKYASVIATILKPDHNKAIR
SRQISNENISMLAWNTLWPQERKRQRSFFLFGLALILQQDIEGIRIFFHTFFRLPTWMWQ
GFLGSTLSSADLILFALYMFVLAPNNLRKNLVRHLLSDPSGATMIRTYFTFH
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggactgcgttgcagcaatgacggcgtcgttttgcccgacctggagggcgaggagaaga
ggaggactggcgggtggaaaggaaggtccttttttccggtatggtttgtgcaacaaggtt
tctctgctgcgagtgagagcgagtgcaggaggcgaagggggcggtgttggggtggcggtg
aaggaagggtttgcggacgaggaggatttcatgaagggcggcgggccggaactgctctta
gttcaaatgcagcagaaaaaggtcatggagaagcagtccaagctcgctgaaaagctactg
ccaataccagtaggagatagtgttctggatttggtggtgattggttgtggtccggcaggt
cttgctctggctgcagaatcagccaagttgggattaaaagttgggcttattggccctgat
ctccctttcacaaacaactatggtgtttgggaggatgaattcaaagatcttggactagaa
gggtgtattgagcatgtttggcagaacaccatagtgtatcttgacggtgattcggacccc
attatgatcgatcgtgcttatggtcgtgtttgtcgagacatgctacacgaggagctcttg
agaaagtgtgtggagtcaggtgtttcgtacctcgattcaagggtggaaagtattgttgaa
gctagcaatgggattagccttgtatcctgtggccacaatattgttgtttcgtgcaggctt
gctactgttgcatcaggagctgcttcggggaagcttttgcagtacgaggtgggtggtcca
aaggtgtctgtccaaacagcatatggtatcgaggttgaggtggaaagtaacccatatgat
cccgaagtgatggttttcatggattatagagactacatgaaacaaaaagttcggtcttca
gaagcagaatatccaacgtttctttatgtcatgcccatgtctccgactagattgttcttt
gaggaaacttgcttggcttctaaagaagccatgccttttgatttattgaagaaaaagctc
ttgtcacggttacagacaatgggaatccgtattacaaaaacttatgaagaggaatggtct
tggattccggttggtggttccttaccaaatacagagcaaaagaacctagcatttggtgct
gctgcttgcatggtacatcctgccacaggatattcagttgcaaggtctttgtcggaggct
ccaaaatacgcttctgtgattgcaactattttgaagccagatcataataaggccattcgc
agccgccaaataagtaacgagaacatctcgatgctagcatggaatacactctggccgcaa
gaaaggaaacgccaaagatcattctttcttttcggactagcgcttattctgcagcaggac
atcgagggcatcaggatattctttcacactttcttccgcttacccacctggatgtggcag
ggtttcctcggctctacgttgtcctcggctgatctcatccttttcgcgttgtatatgttt
gttttagcaccaaataacttgagaaagaacctcgtcagacacctactttctgatccttcc
ggagccactatgattagaacctatttcacattccattag
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