Methylomonas denitrificans: JT25_022205
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Entry
JT25_022205 CDS
T04191
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
mdn
Methylomonas denitrificans
Pathway
mdn00190
Oxidative phosphorylation
mdn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
JT25_022205
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JT25_022205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdn03019
]
JT25_022205
Enzymes [BR:
mdn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
JT25_022205
Messenger RNA biogenesis [BR:
mdn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JT25_022205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Capsid_pestivir
Motif
Other DBs
NCBI-ProteinID:
AMK79161
UniProt:
A0A140E6Y7
LinkDB
All DBs
Position
4842591..4844660
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AA seq
689 aa
AA seq
DB search
MESIDLTSPELYINREHSLLEFNFRVLAQALDETLPLLERLNYLCISCSNLDEFYEVRVA
SLIQMAEMDPNLVSSDGLTINEQFEKISIKAHELVAEQYRVLNEVLIPCLEAENIRFLRR
DRWSPAQKAWLEKYFNEELLPILTPVGLDSAHPFPRILNKSLNFIISLTGKDAFGRNSGR
AILQAPRALPRIVQLPVTETDSGPYDFVFLSSIIHAFVNELFNGMMVKGCYQFRVTRNSD
FFVDDDAIDDLMLAVEGELAMRNYGDEVRLEIDGNCPEETVNFLLARFDLKPDRLFLANG
PVNLSRIQTILNMVERPDLKFTPFKSSVPSALGRNKDIFASIRKQDILLHHPYESFSPVV
DFIRQAAADPDVLAIKQTLYRTGVDSPIVAALIKAARAGKEVTVVIELRARFDEKDNIGL
AAKLQEAAAHVVYGVVGYKTHAKMCMVLRKEGTTLRNYVHLGTGNYHPKTARLYTDYGLF
TCEKELGEDVRRVFMQLTSLGKVSKLNKLLQSPFTLHHGIMKMIDREIEHAKKGKPAKII
IKVNAVVEEQAIQALYRASQAGVEIKMIVRGVCCLRPGVPGVSENIEVRSIVGRFLEHTR
IYAFCNGGDWAVYASSADLMNRNMFRRVEVCFPIADKRIAERILNDLDAYLRDNAQAWQL
QSDGQYRHLRAEGLPVYQVQSELLKAFCG
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaatcgatctaactagtcccgagctttatataaaccgcgaacacagtttgctg
gagttcaactttcgggtgctcgctcaagccctggacgaaacgctgcccctattggaacgg
ctgaattacttatgcatttcttgttccaatctggatgagttctacgaagtacgtgtcgcc
agcttgatacaaatggcggaaatggaccctaacctggtcagttccgacggtttgaccatt
aacgagcaattcgaaaaaatctcgatcaaggcccacgaactggttgccgagcaatacaga
gtgctcaacgaagttctgattccctgcctggaagccgaaaatatccgtttcctgcgccgc
gatcgctggagccccgcgcaaaaggcctggttggaaaaatatttcaacgaagagctgttg
ccgattctgaccccggtaggactggattctgcacatccgtttccgcgcattctgaacaaa
agtttaaatttcattatctccctgaccggcaaagatgcattcgggcgtaacagcggccgg
gcgattttgcaggcgccgcgcgctttaccgcgcatcgtgcaattgcctgttacggagaca
gacagcggcccttacgattttgtctttctatcttccatcattcacgccttcgtcaatgag
ttgttcaacggcatgatggtgaagggctgttatcagttccgggtcacccgcaacagtgat
tttttcgtcgacgacgacgcgatcgacgacttgatgctggccgtggaaggcgaattggca
atgcgcaattacggcgacgaagtgcgtctggaaatcgacggcaattgcccggaagaaacc
gttaatttcttgttggcgcgttttgatttaaaaccggaccgtttatttttagccaacggc
ccggtcaacttgagccgcatccaaaccatattaaatatggtcgaaagacccgatcttaaa
tttacgccgttcaaatccagcgtgccgtcggcactaggccgcaataaggacatctttgcc
agcattcgtaagcaggacattttattgcaccacccgtacgagtcgttctcgccggtggtg
gattttattcgccaggcggctgccgacccggatgtgctggctatcaaacaaaccctgtat
cgcaccggcgtggactcgcccatcgtcgccgcgctgatcaaggccgcccgcgccggcaag
gaagtgaccgtggtcatcgaactacgggcgcgcttcgacgaaaaagacaatatcggcttg
gcagccaaattgcaggaagccgcggcccatgtggtgtacggcgtggtggggtataaaacc
cacgccaaaatgtgcatggtcttgcgcaaggaaggcaccacgctacgcaattacgtgcat
ttgggcaccggcaactatcacccgaaaaccgctcgactctataccgactacggtttgttc
acctgcgaaaaagaattgggcgaagacgtacgccgggtattcatgcagttgaccagccta
ggcaaggtgagcaagctcaataaactgctgcaatcgccgtttaccctacatcatggcatc
atgaagatgatagacagggaaatcgagcacgcgaaaaaaggcaaaccggccaagattatt
atcaaggtcaatgccgtggtcgaggaacaggcgattcaagcgctatatcgggcgtcgcaa
gccggcgtggaaatcaaaatgatcgtgcgtggcgtctgctgcttgcgtccgggcgtaccc
ggtgtttccgagaatatcgaagtgcgctccatcgtcggccgctttctggaacatacccgt
atctatgcgttttgtaacggtggagactgggctgtttatgcctcgagtgccgatttgatg
aaccgcaatatgttccgccgtgtggaagtctgtttccctatcgccgacaagcggattgcc
gaacggattcttaacgacctggatgcgtatctcagagataacgcccaagcttggcaattg
caaagcgacggccaataccggcacttgcgtgccgaaggtctgcccgtttatcaggtacaa
agcgaactgctcaaagctttttgcggatag
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