Monodelphis domestica (gray short-tailed opossum): 100017655
Help
Entry
100017655 CDS
T01031
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100017655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100017655
Enzymes [BR:
mdo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
100017655
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
100017655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
AAA_18
MMR_HSR1
AAA_16
AAA_22
TniB
CbiA
nSTAND3
Motif
Other DBs
NCBI-GeneID:
100017655
NCBI-ProteinID:
XP_016281775
Ensembl:
ENSMODG00000024148
UniProt:
F6U3G0
LinkDB
All DBs
Position
8:231988848..231990648
Genome browser
AA seq
425 aa
AA seq
DB search
MAEESNDEKKPLAKFELERETELRFEVEASQSAQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEREEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRREYRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENISETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaatccaatgatgaaaagaagcccctggctaagttcgagttagaacgagag
acagaactgcgttttgaggtggaagcctcccagtcagcccagctggaactactggctggc
atggctgagatctttggcacagaactgactcgaaacaaaaaattcacttttgatgcaggt
gccaaagtggctgtctttacttggcatggctgttctcttcagctgagtgggcgcactgag
gtggcttatgtctccaaggacacccccatgctcctttatcttaacactcacacagccctg
gaacaaatgaggcggcaagcagagcgtgaggaagagagaggtcctcgagtgatggtagtc
ggccctacagatgtagggaagtccacagtgtgccgcctattactgaattatgctgtgcga
ctaggccggcgacccacctatgtggagctggatgttggccaaggctcagtatccattcct
ggaactatgggagccctttacattgagcggcctgctgatgtagaggagggtttctctatc
caggccccattagtctatcattttggttctaccacacctggcaccaacatcaagctttac
aataagatcacatctcgccttgctgatgtcttcaatcaacgttgtgaggtgaatcgccga
gcctctgtcagtggctgtgtcattaacacctgtgggtgggtcaagggctctggctaccag
gccctggtgcatgctgcttctgcttttgaggtggatgtggtggtagtactggaccaggaa
cgactgtacaatgagctaaagcgggacttgcctcattttgtgcgcactgttctactcccc
aagtcaggaggagtggttgaacgttcgaaggacttccgtcgggagtatagggatgagcgt
atccgagaatatttctatggcttccgaggctgcttctatccccatgccttcaatgtcaag
ttctctgatgtgaaaatctacaaggtgggggcacccaccatcccagactcatgtcttcct
ttgggaatgtcacaggaggacaaccagctgaaactggtaccagtcaccccagggcgagat
atggtgcaccacctcttgagtgtcagcacagctgagggcactgaggagaacatctctgag
accagtgtggctggcttcattgtggtgactagtgtggacctggagcaccaggtctttact
gtgctctctccagcccctcgcccactacctaagaacttcctcctcatcatggacatccgc
ttcatggatctcaagtag
DBGET
integrated database retrieval system
