Monodelphis domestica (gray short-tailed opossum): 100024680
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Entry
100024680 CDS
T01031
Symbol
CDKAL1
Name
(RefSeq) CDK5 regulatory subunit associated protein 1 like 1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdo03016
]
100024680 (CDKAL1)
Enzymes [BR:
mdo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
100024680 (CDKAL1)
Transfer RNA biogenesis [BR:
mdo03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
100024680 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
100024680
NCBI-ProteinID:
XP_001375874
Ensembl:
ENSMODG00000024659
LinkDB
All DBs
Position
3:complement(318294981..318990307)
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AA seq
579 aa
AA seq
DB search
MPAASCDSPLADIEDIVSREDSKPQDRYFSRKNIVPKVRIRNTQKCLQEEDDPPSDSTIP
GIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENPSEADLWLLNSCTVKNPAEDHFRN
SIKKAQEEDKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKSNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVDR
AKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEH
LEEMAKILNHPRVYAFLHIPVQSASDSVLMEMKREYCVADFKRVVDFLKEKVPGLTIATD
IICGFPGETDQDFQDTLKLVEDYKFPSLFINQFYPRPGTPAAKIQQVPAHVKKQRTKDLS
QLFHSYNPYDHKIGERQQVLVTEESFDSKFYVAHNQFYEQVLVPKNPMFMGKMVEVDIYE
SGKHFMKGQPVSNAKVYTPSISKPLAKGEVSGLTEEFRHVLENGTRREAPGSAKGLGAGL
GPRTGFQMPWMLPDGGLKTLSVALALLALLIAFFMKTQP
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcatcttgtgattcacctcttgcagacatagaagatattgtgtcaagagaa
gattcaaagcctcaggatagatatttttcaagaaaaaatattgttccaaaggtgcgaata
cgtaatactcaaaaatgtttgcaagaggaagatgatccaccaagtgatagcactattcct
ggtattcagaaaatttggatacggacatggggttgttctcacaataattcagatggagag
tatatggctggtcaactagctgcttatggatataaaattacagaaaatccatcagaagca
gatttgtggctgctgaatagttgcactgtgaaaaatccagctgaagatcactttagaaac
tcaattaagaaagctcaagaggaagacaagaaagtggttttagctggatgtgtcccccaa
gcacagcctcgtcaggactatctcaaaggcctgagtatcataggggttcagcaaatcgat
cgtgtagtagaagttgtggaggaaaccattaaaggtcattcagtgagactccttggtcag
aaaaaatctaatggaaaacgtttgggaggagctcgattggatttgccgaagataagaaaa
aatccactgatagaaatcatttcaatcaatacagggtgtctcaatgcttgtacctactgt
aaaacaaagcacgccagaggaaatttggccagttatccaattgatgaactagtagataga
gccaaacagtctttccaagagggtgtctgtgagatatggctgaccagcgaagatacaggg
gcttatggcagagatattggcactgacctccctacactgctgtggaaactagttgaagtg
attcctgagggagctatgctacgacttggcatgacaaatccaccctatattttagagcat
ctggaggaaatggcaaaaatccttaatcatccaagagtctatgcttttctgcatatacca
gtacaatcggcctctgacagtgtgctaatggaaatgaaaagagaatattgtgtggcagac
ttcaaacgagtagtagattttctgaaagaaaaagttccaggactaacgattgctacagat
atcatctgtggttttcctggggaaacagatcaagattttcaagacactttgaaactggtt
gaggattataagtttcccagcctttttatcaaccaattttatccacgaccagggacccct
gctgcaaaaatacaacaagttccagcacatgtgaaaaagcaacggacaaaagacctttct
cagctatttcattcatataacccatatgatcataagattggtgaaagacagcaagtgctg
gtaacagaagaatcttttgattccaagttttatgttgcacacaatcaattctatgagcag
gtacttgtgccaaagaaccccatgttcatggggaaaatggttgaagtagacatttatgaa
tcaggaaaacactttatgaagggacagccagtatccaatgccaaggtttacactccatcc
atcagtaaaccattagcaaagggagaagtttctggtttaacagaggagtttcgacacgtg
ctcgagaacggcacccggagggaagcccccgggtctgccaagggcctgggagcgggcctg
gggcccaggacaggcttccagatgccctggatgctgccggacggaggactgaagacgttg
tcggtggccttggctctgctagcccttctcatagctttttttatgaaaacgcagccatag
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