Monodelphis domestica (gray short-tailed opossum): 100031159
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Entry
100031159 CDS
T01031
Symbol
POLR1B
Name
(RefSeq) RNA polymerase I subunit B
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100031159 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdo03021
]
100031159 (POLR1B)
Enzymes [BR:
mdo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100031159 (POLR1B)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
100031159 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
100031159
NCBI-ProteinID:
XP_001373893
Ensembl:
ENSMODG00000006573
UniProt:
F7B818
LinkDB
All DBs
Position
1:594553118..594576130
Genome browser
AA seq
1135 aa
AA seq
DB search
MDPSCKWRNLPTGPSLKHLTEPGYGLPKEQQLPALQELTRAHIESFNYAMREGLSHAVQA
IPPLEFAFKDERITLAIVDAVVSPPMVPKGSICKELKVYPAECRGRRSTYRGKLTADISW
SVNGNPKGIIKQSLGYIPIMVKSRLCNLYNLPPKSLIEHHEEAEEMGGYFIINGIEKIIR
MLIMPRRNFPIAMIRPKWKTRGPGYTHYGISMHCVRDEHTAINMNLHYLENGSVMVNFIY
HKELFFLPLGFVLKALVAFSDYQIFQELIKGREENSFFRNCVSQMLRVVMEEGCITQKQV
LNYLGERFRVKLSLPDWYTNVQAAEFLLNQCVCIHLKSNEEKFYVLCLMTRKLFTFAKEE
CMEENPDSLMNQEVLTPGRLILMFLKEKMEAWLVSVKIALDKRAQKTNVSMNTENLMKIF
SMGLDLTRPFEYFLATGNLRSKTGLGMLQDSGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAICEVVTQAVYTSSIAPLLCSLGVT
PFDGTPSQPYSECYPVMLNGIMVGWVEKDLAPAITDSLRNFKVLGKKQIPPWTEIVLIPK
TGKPSLYPGLFLFTTPCRMIRPVQNLELGKEELIGTLEQIFMNIAIFENEIVPGITTHQE
LFPHSLLSVVANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKTELID
LSEKIKQGDDSLVFGVKPGDLRVLQKLDSDGLPHIGSLLKYGDPFYSYLNINTGESFVTY
YKNKENCLVDNIKVCSNDSGNGKFKSICITMRIPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEENSALG
YFGEMLKAAGYNFYGTERLYSGISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTVCNQSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagttgtaagtggcggaatttgcccactgggcccagcctgaaacacttgact
gaaccgggttatgggctccccaaagagcagcagctacccgctttgcaagaactcacgcgg
gcgcacatcgagtccttcaattatgctatgcgagagggactcagccacgcggtgcaggcc
attccacccttggaatttgccttcaaagatgaacggatcactcttgctatcgtggatgct
gttgttagtcctcctatggtcccaaaggggagcatctgcaaagagttgaaagtctaccca
gcagaatgtcggggtcggagaagtacataccggggaaagctgacagctgatatcagctgg
tctgtgaatgggaacccaaagggaattattaaacaatcccttggctatattcctattatg
gtgaagtctaggctgtgcaatttatataatcttcctccaaaatctcttattgagcaccat
gaagaggcagaggagatgggaggatattttataataaatggtattgaaaaaattatcagg
atgctgattatgcctcggagaaattttcccattgcaatgataagaccaaaatggaaaacc
agaggccctggctatacccattatggaatatcaatgcattgtgttagggatgagcacaca
gctatcaacatgaaccttcattacttggaaaatggctcggtgatggtgaattttatttat
cataaagagttattttttcttcctctgggatttgtactcaaggcactggttgccttttct
gattaccagatttttcaggagctgatcaaaggaagagaggagaactcattttttaggaac
tgtgtttctcagatgttgagagttgtaatggaagaaggttgtattacacaaaagcaggtc
cttaactacttgggagaacgtttcagggtaaagctcagccttcctgattggtacacaaat
gtacaagctgcagaatttctgttaaatcagtgtgtgtgtatccatctgaaatccaatgaa
gaaaagttctatgtgctttgtctcatgactcggaagttgtttacttttgccaaagaggaa
tgtatggaggagaatcctgatagcttaatgaaccaggaagttctcaccccagggagactc
atccttatgtttttaaaggaaaagatggaagcgtggttggtgtctgttaaaatagccttg
gataaaagggctcaaaagaccaatgtctctatgaacactgaaaatctgatgaagatattt
agtatgggattagaccttacaagaccatttgaatattttcttgctactggaaacttacga
tcaaaaacaggcctcggcatgcttcaagactctgggctgtgcgtggtggccgacaagctg
aatttcatccgttacctgtcccacttccgctgcgtgcatcgaggggccgcctttgccaag
atgaggaccaccacggtccgcaagctgctcccggagtcctggggcttcctctgtcccgtg
cacacgccggacggggagccctgcggcctgatgaaccacatgacagccatctgcgaggtg
gtcacgcaggccgtctacacgtcctccatcgcccctttgctttgctccttaggggttacc
ccatttgatggaacaccaagtcaaccttatagtgaatgctaccctgttatgttgaatggt
atcatggttggctgggtggaaaaggaccttgctcctgccattacagattctctccggaat
tttaaggtattggggaaaaaacaaatccctccttggacggaaatagtccttatcccaaag
actggaaaaccaagtttgtaccctggactgtttcttttcactactccttgtagaatgata
cgacctgtgcaaaacttggaactgggtaaagaagaactgattggcactctggaacagatc
tttatgaacattgctatctttgagaatgagattgttcctggaataaccacacatcaggag
ctctttcctcacagtctgctcagtgtggtagccaatttcattcctttttctgaccataat
cagagtccccgaaacatgtatcagtgccagatgggtaaacaaaccatgggatttccactt
cttacttaccaggaccgatcagataataaactatatcgtcttcagactccacaaagccca
ttagtcagaccttacatgtacgattactatgatatggataactatcccattgggacaaat
gctattgttgctgtcatttcttatacaggctatgatatggaagatgccatgattgtgaat
aaagcttcctgggaaagaggctttgctcatggaagtgtctataagacagagctcatagat
ctttctgaaaaaatcaaacaaggagatgacagtctggtgtttggagtcaaacctggagat
ctacgtgttctacagaaattagacagtgatggcttgccacatattggatctcttctgaaa
tatggagaccctttttatagttacctaaatatcaacacgggagaaagttttgtgacatac
tataaaaataaagaaaactgtcttgtggataacatcaaagtctgtagtaatgactccggg
aatgggaaattcaaaagcatctgcatcaccatgaggatcccccggaacccaacgatcggg
gacaaatttgccagtcgtcacggccagaaggggattctgagtcggctgtggcccgccgag
gacatgccctttacggagagcgggatggtcccggacattctgttcaatccgcacggcttt
ccgtcccggatgaccatcggcatgctgatcgagagcatggcggggaagtcggcggccctg
catgggctctgccacgatgccacccccttcaccttttcggaggagaactccgcattgggc
tactttggggagatgctgaaggcggccggctacaacttctatggcacggagagactgtac
agcggcatcagcggggtggaactggaagcggacatcttcatcggggtcgtctactaccag
cgcttgcgccacatggtctcggacaagttccaggtgaggacgacgggcgcccgagacaaa
gtcacgaaccagcccatcgggggccggaacgtccagggtgggatccggtttggggagatg
gaacgggacgccctgctggcgcacggcacctccttcctgcttcacgaccgcctcttcaac
tgctcggaccgctcagttgcccatgtgtgcgtgaagtgcggcagcctgctttcaccgttg
ctggagaagcccccgccgtcctggtctgccatgcgcaacaggaagtacaactgcaccgtg
tgcaaccagagcgacaccattgacacggtgtccgtgccttacgttttccgctactttgta
gctgaattggcagctatgaacatcaaagtcaaactcgatgttgtttaa
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integrated database retrieval system
