Monodelphis domestica (gray short-tailed opossum): 100032965
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Entry
100032965 CDS
T01031
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion molecule 1
KO
K06527
vascular cell adhesion molecule 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04064
NF-kappa B signaling pathway
mdo04514
Cell adhesion molecules
mdo04668
TNF signaling pathway
mdo04670
Leukocyte transendothelial migration
mdo04933
AGE-RAGE signaling pathway in diabetic complications
mdo05143
African trypanosomiasis
mdo05144
Malaria
mdo05417
Lipid and atherosclerosis
mdo05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100032965 (VCAM1)
04668 TNF signaling pathway
100032965 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100032965 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100032965 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
100032965 (VCAM1)
05143 African trypanosomiasis
100032965 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100032965 (VCAM1)
05418 Fluid shear stress and atherosclerosis
100032965 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100032965 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mdo04090
]
100032965 (VCAM1)
04091 Lectins [BR:
mdo04091
]
100032965 (VCAM1)
CD molecules [BR:
mdo04090
]
Proteins
100032965 (VCAM1)
Lectins [BR:
mdo04091
]
I-type lectins (Siglecs)
100032965 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
C2-set
V-set
C2-set_2
Ig_5
Ig_4
Izumo-Ig
Ig_6
ICAM1_3_5_D2
PASTA
Motif
Other DBs
NCBI-GeneID:
100032965
NCBI-ProteinID:
XP_007485096
Ensembl:
ENSMODG00000003497
UniProt:
F7CRW5
LinkDB
All DBs
Position
2:467517257..467542096
Genome browser
AA seq
743 aa
AA seq
DB search
MYKMSGQKLMIVLAANLLWMIFAASEDLNIEVGPSSRIAAQIGGYTELTCTMTGCESPFF
SWRTQIDSPLGGKVQNEGTKSTLIMNPVSFQNEHAYLCTASCGSKKVERGIQVELYSFPS
DPEIEMSGPLIVGSPITVTCKVPKVYPSERLEMAFLMEGSYHPMEVHEIVEDAEESILVT
KGLKMTFTPTMEDMGKSLTCEAKLPIDEMDFEPKERRTTQKLQVNDVPKNTAISISPSNI
VQEGDPVTLTCSSEGLPPPRIFWNKKQDNEDPLPLSENATLTLVATRREDSGTYVCEAKN
QFGKSRKEVEIIVQGKPLRVEVSPGPKTAAQIGDSVVLTCTMMGCEAPFFSWRTQIDSPL
GGKVSNEGTKSTLIMNPIGFENEHSYLCTASCGDRKVEKGIQVELYSFPSDPEIEMSGPL
IVGSPITVTCKVPKVYPSERLEMAFLMEGSHLPMERQEIVEDAEESILVTKGLKMSFTPT
MEDMGKSLTCEAKLPIDEMEFEPKERRTTQILQVKMRPKDTSLTAFPSDSVKEGDSVTIS
CTSGDVPKSQIILRKKTEWGETELEFTAGTYIIPAAQLEDAGMYECESKNEGGSEVRSLM
LDVKVPPRNTTIFIHPSRTVLEGENVTITCKTFSHPPAVIVLKKVDVDNEVTMCSKNGTF
TLYHVTPDDTGVYVIDISNEVGNDSGQIEISVIEMPKYFSPQLVALYCLSSLIIPATGMV
IYFARKANHKGSYSLVDALKSKV
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaatgagtggacagaagctcatgattgtcctggccgcaaacctgctttggatg
atatttgcagcatcggaagatctgaatattgaggttggcccgagttccaggatcgcagct
cagattggtggttacactgaactgacctgcactatgactggctgtgaatcgccttttttc
tcctggagaactcagatcgacagccccttaggggggaaggtgcaaaatgaggggaccaag
tctaccttgatcatgaatcctgttagctttcagaatgaacatgcttatctttgcacagcc
tcatgtggaagcaagaaagtggaaagaggaatccaggtggaactctattctttccccagt
gatccagaaattgagatgagtggcccccttattgttggaagccccatcactgtcacctgc
aaggtcccaaaggtgtacccctcagaacggctagagatggcatttttgatggaaggctct
tatcatcctatggaagtacacgagattgtggaggatgctgaagagagcatcctagtgacc
aagggtttgaagatgacctttacccccaccatggaagacatgggaaaatccctcacctgt
gaagccaagttacctattgatgaaatggattttgagcctaaagaaaggagaactacccaa
aaacttcaggtgaatgatgtgcccaagaacacagctatctccatcagcccctccaacatt
gttcaagaaggggatcctgtgacactgacctgttccagtgagggcctgccacccccaagg
atcttttggaataaaaaacaggacaatgaggacccattgcctctttctgagaatgcaaca
ctcactttggtggccacaaggagggaagattctggaacttatgtgtgtgaagcaaagaat
caatttgggaaaagtagaaaggaggtggagataattgttcaagggaaacctcttagagtg
gaagtctccccaggaccaaagactgccgctcagattggcgattctgttgtgctgacctgt
accatgatgggctgtgaggccccttttttctcctggagaacccagatagacagcccccta
ggagggaaggtatccaatgaggggaccaaatccaccttgatcatgaatcccattggcttt
gagaatgaacattcttatctgtgcacggcatcatgtggggacaggaaagtggaaaaaggc
atccaggtggaactctactctttccccagtgatccagaaatcgagatgagtggccccctt
attgttggaagccccatcactgtcacctgcaaggttccaaaggtgtacccctcagaacgg
ctagagatggcattcttgatggaaggctctcatcttcctatggaaagacaagaaattgtg
gaggacgctgaagagagcatcctagtgaccaagggtttgaagatgtcctttacccccacc
atggaagacatgggaaaatccctcacttgtgaagccaagttacctattgatgaaatggaa
ttcgagcccaaagaaaggagaactacacagatacttcaagtgaagatgcgtcccaaagac
acaagccttacagctttcccttctgatagcgtcaaggaaggagactcagttactatttcc
tgtacatctggggatgttccaaaatctcaaattatcctgaggaagaaaacagagtgggga
gaaacagaactcgagtttacagctggcacttatatcattcctgccgcccagttagaggat
gctggaatgtatgaatgtgaatctaaaaatgagggtggatcagaagttcgaagcctaatg
cttgatgttaaagtacctcctcgaaatacaacaatattcatccatccatctagaactgtt
ctcgaaggggaaaatgtcaccattacatgcaaaacttttagtcatcctcctgccgtgatt
gtcctcaaaaaagtcgatgtggacaatgaagtgactatgtgttcaaagaatgggacattt
accttatatcatgtcactcccgatgacacaggagtgtatgtaatcgatatttccaatgaa
gttggaaatgattctggacagattgagatctcagttatagaaatgcctaaatatttttct
cctcaacttgttgcattatattgcttatcctccctgataattccagccactggaatggtc
atctactttgcaagaaaagccaaccacaaaggttcttacagtttggtagatgccttgaaa
tcaaaagtgtag
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