Mycolicibacterium doricum: MDOR_23840
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Entry
MDOR_23840 CDS
T06662
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mdr
Mycolicibacterium doricum
Pathway
mdr00900
Terpenoid backbone biosynthesis
mdr01100
Metabolic pathways
mdr01110
Biosynthesis of secondary metabolites
Module
mdr_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
mdr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MDOR_23840
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mdr01006
]
MDOR_23840
Enzymes [BR:
mdr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
MDOR_23840
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
MDOR_23840
2.5.1.29 geranylgeranyl diphosphate synthase
MDOR_23840
Prenyltransferases [BR:
mdr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
MDOR_23840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BBZ08215
UniProt:
A0A1X1T6N7
LinkDB
All DBs
Position
2398667..2399746
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AA seq
359 aa
AA seq
DB search
MDAAAPSAAELAEAVTEQLRDYLSVRRRDAAYIGSDYAELTAALEEFVLRGGKRLRPAFA
YWGWRAVADRPVDSGVLMLFSALELLHACALVHDDVIDASATRRGLPTVHRLFADRHAEQ
GWHGSSEQFGLSAAILLGDLSLVWADDIVTSVDLPLAAHRRVQRVWADIRTEVLGGQFLD
IAAEASGAETVASAIAVNTYKTASYTVSRPLQLGAAAAADRPEVQEIFHQLGTDIGVAFQ
LRDDVLGVFGDPVVTGKPSGDDLRSGKRTVLLAEAVELADKTDPDTAAQLRSSIGTDLSE
PQVRELRWAIESVGALAAVEERIALLTRRSLEALDSAPIDAQAKAGLTELARLAANRSA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
gtggatgccgcggctccgtcagccgccgagttggccgaagccgtcaccgagcagctgcgg
gactacctgtccgtccgccggcgtgatgccgcctacatcggttcggactacgcggagctg
accgccgccctcgaggagttcgtcctgcggggaggtaagcgcctccgcccggccttcgcc
tactgggggtggcgggcggtggcagaccgccccgtcgacagcggtgtcctgatgctgttc
tccgccctggaactgctgcacgcgtgtgcgctcgttcacgacgacgtgatcgacgcctcg
gcgacgcgacgcgggttgcccaccgtgcaccggttgttcgccgaccgccacgccgaacag
ggctggcacggttcctccgaacagttcggcctgtcggcggcgatcctgctcggggatctg
tcgctggtgtgggccgacgacatcgtcacctccgtcgacctgcccctcgccgcgcaccgc
cgcgtgcaacgggtgtgggccgacatccggaccgaggtgctcggcgggcagttcctcgac
atcgccgccgaagccagcggagccgagaccgtcgcctcggcgatcgcggtgaacacctac
aagaccgcgtcctacaccgtgtcccgcccgctgcagctgggcgccgccgcggccgccgac
cggccagaggtgcaggagatcttccaccagctcggcaccgatatcggggtggccttccag
ctgcgcgacgacgtgctgggcgtattcggggatccggtcgtcacgggcaaaccctccggc
gacgacctccggtcgggtaagcggaccgtgctgctggccgaagccgtcgaactggccgac
aagaccgatccggacacggccgcgcaactgcgctcgtcgatcggcaccgacctgagcgag
ccgcaggtgcgcgaactgcgttgggccatcgagtcggtcggcgcgctggccgcggtggag
gaacgcatcgccctgctcacccgccgctcgctggaggcgctggactcggcaccgatcgac
gcgcaggccaaggccggtctcaccgaactcgccagattggccgccaaccggtccgcctga
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