Methanobrevibacter sp. AbM4: Abm4_1659
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Entry
Abm4_1659 CDS
T02687
Symbol
rpoF
Name
(GenBank) DNA-directed RNA polymerase subunit F RpoF
KO
K03051
DNA-directed RNA polymerase subunit F [EC:
2.7.7.6
]
Organism
meb
Methanobrevibacter sp. AbM4
Pathway
meb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
meb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Abm4_1659 (rpoF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meb03021
]
Abm4_1659 (rpoF)
Enzymes [BR:
meb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Abm4_1659 (rpoF)
Transcription machinery [BR:
meb03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Abm4_1659 (rpoF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Motif
Other DBs
NCBI-GeneID:
15799146
NCBI-ProteinID:
AGN17516
UniProt:
R9SND6
LinkDB
All DBs
Position
1896697..1897029
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AA seq
110 aa
AA seq
DB search
MIGKNTVNREPIPAAKVKSILEKFGENHDLSYEQNVTLNHVSTFSQLSEEDTDKLVAELE
GKVKRKYAVRIADLLPQDLDDMRLIFAKERISLSKEDMEEILEIVEKYTL
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgataggtaaaaatacagtgaatagagaacctatacctgcagctaaagtaaaaagtatt
ctcgagaaatttggtgaaaatcatgaccttagttatgaacaaaatgttacattaaaccat
gttagtacttttagccaattatctgaagaggataccgacaaattagtagctgaacttgaa
ggaaaagttaaaaggaaatatgcagttcgtatagctgatttattacctcaagatttagat
gatatgagattaatttttgctaaagaaagaatttcattatctaaagaagatatggaagaa
attcttgaaatagttgaaaaatacacattataa
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