Methanosarcina sp. WH1: MSWH1_0677
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Entry
MSWH1_0677 CDS
T03851
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
mef
Methanosarcina sp. WH1
Pathway
mef03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSWH1_0677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mef03021
]
MSWH1_0677
Enzymes [BR:
mef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSWH1_0677
Transcription machinery [BR:
mef03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSWH1_0677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Fer4_7
Fer4_9
Fer4
Fer4_16
Fer4_6
Fer4_21
Fer4_8
Fer4_10
DUF4879
Motif
Other DBs
NCBI-ProteinID:
AKB20948
UniProt:
A0A0E3KWM8
LinkDB
All DBs
Position
complement(795654..796454)
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AA seq
266 aa
AA seq
DB search
MTMEVDILELSDRSAKFVLSKASTAFANGIRRAMIADVPTLAIEYVNLYDNTSVLYDEQL
ALRLSLIPLVTDIETYMPQAECEICGGEGCPACEVSLTLSAEGPCTVYSRDLISADPKIQ
PADPNIPIVELKKGQKLVLEAIAHMGYGRDSVKWQAGVACGYKNVPVITIENCDACGHCA
AECPKGIIRVEEAGAKVAEDDVIRCSLCRLCEKVCDINAIKVGFQENAFVFTMESDGSYT
SKDLVFNAANVVKSKAEELLTILNQL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggaagtagacattctggagttatcggatagatctgcaaagtttgtgctgtca
aaggcaagcacggcttttgctaacggcatccggcgtgccatgatcgccgatgtacccact
cttgcaattgagtatgtaaacctttacgacaacacctccgtgctctatgatgaacagctg
gctctccgtctctccttaatcccactcgtaacggatatagagacgtatatgcctcaagct
gagtgcgaaatctgcggaggagaaggctgccctgcctgtgaggtctccctgaccctcagt
gcagaaggtccctgtaccgtttattcgcgggacctcatctccgctgaccccaagatacag
ccagcagatccgaatataccgattgttgagctgaaaaaaggacagaagcttgtgctagag
gcaattgcccacatgggttacggtagagacagcgttaaatggcaagccggtgttgcatgc
ggctacaaaaacgtgcctgttataaccattgaaaactgcgatgcctgcgggcactgtgca
gcagaatgtcctaagggcattatcagagttgaagaggccggagcaaaggttgctgaggac
gatgtcataaggtgttccctctgcaggctttgtgagaaagtgtgcgacattaacgcgata
aaggtgggcttccaagaaaacgcttttgtttttaccatggagtccgatggttcatatacc
tccaaagaccttgtctttaacgccgcaaacgttgttaaaagcaaagccgaagagttgctt
acaattctgaaccagctctga
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