Methanosarcina sp. WH1: MSWH1_1356
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Entry
MSWH1_1356 CDS
T03851
Name
(GenBank) tRNA S(4)U 4-thiouridine synthase (former ThiI)
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
mef
Methanosarcina sp. WH1
Pathway
mef00730
Thiamine metabolism
mef01100
Metabolic pathways
mef01240
Biosynthesis of cofactors
mef04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
MSWH1_1356
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
MSWH1_1356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mef03016
]
MSWH1_1356
Enzymes [BR:
mef01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
MSWH1_1356
Transfer RNA biogenesis [BR:
mef03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
MSWH1_1356
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Gene cluster
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Motif
Pfam:
ThiI
THUMP
tRNA_Me_trans
QueC
Trp_syntA
Motif
Other DBs
NCBI-ProteinID:
AKB21627
UniProt:
A0A0E3NQY7
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Position
complement(1650396..1651712)
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AA seq
438 aa
AA seq
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MKGNSDEIKSKNVYDVDKKTKRDRKNMPDNFTDSTDNKDSGSSHQSFENRANVVIVRYGE
LALKSTGVRNWYEKILMKNIAAMLDSRSIPYSLIRREWGRIFIETTDPRAAGVAADVFGV
VSTSPALITEPDLESAARNCALLGTDLIRKGESFAIRARRSGNHSFSSADLGRNCGDAVW
NALEKEGINPSVNLSSPDKEIFVEMRQNLAYIYLETVKGVGGLPLGTQGSMVVLMSGGID
SPVAAWLMMKRGVMIIPVYCNNSPYAEDAAKERAFDCIRQLQAWAPGHQFTTYELPHGPN
LGVFIETCDRKNTCLLCKRMMYREAYEVMKKEGASGIITGSSLGQVASQTAANMYAEIYQ
LAIPVYHPLIAFDKSEIVDIARRIGTYDISTRPAGGCAAVPEHPEVKANYDLIVLEEKKL
GIETMVSDALKASKVLKL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcaattctgatgagatcaaatcaaaaaatgtatatgatgttgataaaaaaact
aaaagagacagaaagaacatgccagataattttactgacagtacggataacaaggactcc
ggttcttctcaccagagcttcgaaaaccgggcaaacgttgttatagttagatatggggaa
cttgctcttaaaagcacaggcgttcggaactggtatgagaaaattctcatgaagaatatt
gctgcaatgctggactcaaggagcattccatattccctgataaggagagaatggggaagg
atatttattgagacaacagatccacgtgcagcaggggtggcagcagacgtttttggggtt
gtttcaacttcacctgcattaataacagaaccagaccttgagagtgcagccaggaactgt
gcacttcttggaacagatcttattcggaaaggagagtcttttgctatccgggctagaaga
agtggaaaccattctttttcttcagcggatctggggagaaactgtggagatgctgtctgg
aacgcccttgaaaaagaaggaataaatcccagtgttaacctgagctctcctgataaggaa
atttttgtcgagatgaggcagaatctggcttatatttacctggagacggttaaaggagtg
ggagggcttcccctcggcacgcagggcagtatggtagtgctgatgtcaggtggcatcgat
tctcctgttgctgcatggctgatgatgaagcgcggtgtaatgattatccctgtttactgt
aataactctccttacgcagaagatgcggcgaaagaacgcgcttttgactgtatccgccag
ctccaggcatgggctccagggcaccagtttacaacttatgaacttcctcacggtccaaat
ctgggggtttttatcgaaacatgtgaccgaaaaaacacatgcctactctgcaaacgtatg
atgtacagggaagcctacgaagttatgaaaaaagaaggtgcaagtgggattattactgga
tcttccctcggacaggtagcctcccagactgcggccaacatgtatgccgaaatttatcag
cttgctatcccggtttatcaccctttaatcgcctttgacaaaagcgagattgtggatatt
gcccgtagaattggaacttatgatatatctacaaggccagctgggggttgcgctgcagtt
ccggagcatcctgaagtaaaggcaaattatgacctcatagttcttgaggaaaaaaagctt
ggtatcgagactatggtgagcgatgctttgaaagcttcaaaagtcctcaaactctga
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