Methanosarcina sp. WH1: MSWH1_2182
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Entry
MSWH1_2182 CDS
T03851
Name
(GenBank) DNA-directed RNA polymerase subunit B'
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mef
Methanosarcina sp. WH1
Pathway
mef03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mef00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSWH1_2182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mef03021
]
MSWH1_2182
Enzymes [BR:
mef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSWH1_2182
Transcription machinery [BR:
mef03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSWH1_2182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
DUF1451
YflT
Motif
Other DBs
NCBI-ProteinID:
AKB22453
UniProt:
A0A0E3KYE2
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All DBs
Position
complement(2674454..2676268)
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AA seq
604 aa
AA seq
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MTKAKVFINGELVGTHDNPAELVEELRKMRRQGFISKQVNIALNDNTREVIINSDMGRAR
RPLVVVENGALKVTEEHIKKLKNKEITFEDLVKEGCVEYLDAEEEENAYIALYESDINSK
HTHMEIDPELMLGICTGMVPYPEHNASPRNTMGAAMIKQCIGVSTANQKLRPDTRAHVLH
YPQRALTRTRTSSAIGFDDRPAGQNFVVAILSYEGYNIEDALIFNKGSIERGLGRSHFLR
TFEGEERRYPGGQEDKFEIPDSEYRGARSADAYANLDIDGLVNPETPVGPNDVLIGKTSP
PRFLEEPSDFGIAVEQRRESSVTMRSNEMGIVDTVILTESINGTRLAKVKVRDERIPDIG
DKFASRHGQKGVIGLKVPIADMPFTESGLTPDLMINPHAIPSRMTVGHVLEMIGGKVGSM
EGRRVNATAFSGENEDDLREALKKHGFAHTGKEVFYDGATGRMIPADVFVGVILYQKLHH
MVTSKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLVGHGAAMSLKERLLDESDK
VVELVCSHCGMIATYDKQRNVSFCSACGADTDIYPVEMSYAFKLLLDEIKSLGVAPRLNL
EDAV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcaaaagtattcataaatggagagctcgtcgggacccatgacaaccctgcg
gaactcgtagaagagctccgaaagatgaggcggcaggggttcatatccaagcaggtcaac
atagctcttaatgacaacaccagggaagtaattataaactccgatatgggccgggcaaga
aggcctcttgtagttgtagaaaacggagctttgaaggtaactgaagagcacataaagaaa
ctgaagaacaaagaaatcacctttgaggacctcgtaaaagagggctgtgtggagtatctg
gacgcagaagaggaagaaaatgcatacattgcactctatgagtctgatattaactccaag
cacacccatatggagatagaccctgaacttatgctcgggatctgtaccggtatggtcccc
tatccagaacacaacgcatccccgcgtaacaccatgggtgcagccatgatcaagcagtgc
atcggagtatccacagcaaaccagaagctcaggccggatacccgtgcccacgtcctgcat
tatccgcagagagcgcttacaaggacaaggacttcctcagcaatcggttttgatgacaga
cctgcagggcagaactttgtggttgcaatcctttcatacgaagggtataacattgaagat
gctctgattttcaacaagggttcaatcgagagagggcttggaagaagccatttcctcagg
acctttgaaggggaagaaaggaggtatcctggtgggcaggaagacaagttcgagattcct
gactccgaataccgtggagcccgcagcgctgatgcgtatgcaaatcttgacatcgacggg
cttgtaaaccctgagacccccgtaggcccaaatgatgtgcttataggaaagaccagccct
ccaagattcctggaagagccttcagacttcgggattgcagttgaacagaggagagaaagc
tctgtcaccatgcggtccaacgaaatggggattgtggacactgtcattcttacagaatcc
attaacgggacccgccttgcaaaggtaaaggtaagggacgagagaattcccgatatcgga
gataagttcgcttccaggcatgggcaaaaaggcgttattggcttaaaagtcccgattgct
gacatgccgtttacggaatcaggtctgactccggacctgatgattaacccgcatgcaatt
ccttcacgtatgactgtagggcacgttctggaaatgattggtggaaaagtaggttccatg
gaaggcagaagagtgaatgcaacagccttctcaggagaaaacgaagacgaccttagagaa
gccttgaaaaaacacggctttgcccatacaggaaaagaggttttttatgatggggcaaca
ggcaggatgatccctgcagatgtcttcgttggtgtaatcctttaccagaaactgcaccac
atggtcacctccaagatgcatgcaaggtcccgtggccctgtacaggtgctcacccgccag
ccgactgaaggtcgagccagggagggtggtctcaggttcggtgaaatggagcgtgacgtg
ctggtagggcacggagccgccatgtccttaaaagaaagattgctggacgagtctgacaaa
gtggttgaacttgtctgctcgcactgcggaatgattgcaacgtacgacaagcagcgaaac
gtctctttctgttcagcctgcggtgctgacacggacatatatcccgtggagatgagctac
gcgttcaagctgttactggatgaaattaagtcccttggtgttgctccaaggcttaatctt
gaagatgctgtataa
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