Methanosphaera sp. ISO3-F5: PXD04_00245
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Entry
PXD04_00245 CDS
T09686
Name
(GenBank) DNA-directed RNA polymerase subunit B''
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
meis
Methanosphaera sp. ISO3-F5
Pathway
meis03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
meis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PXD04_00245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meis03021
]
PXD04_00245
Enzymes [BR:
meis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PXD04_00245
Transcription machinery [BR:
meis03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
PXD04_00245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-ProteinID:
WQH64262
LinkDB
All DBs
Position
1716946..1718457
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AA seq
503 aa
AA seq
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MTKNAWSLVDSFFDEYDIVDHHIRSYNDFLDNKIQEIVDITEPITLDHGEYTIKTGNVEI
VKPYIREADGSKSIIEPAEARLRNLNYSAHMYLDMALVKGDSEDYEMEKVYIGELPVMLK
SKACHLCGLNDEELENVGEDPQDPGGYFIVNGSERAIVTMEEIAPNKIILEQSEKDKADR
RARAVVTSIKSGFRARITLEYRKPHKKGVFLRISFPYVPGEIPLVILLRALGFEKDVDLV
NSVSEDINTQFLLIDDIQTTGINTQYDAVKYIGNRVAKGMTEEYRIKRAEDVIDRYLLPH
VGVDPEDRIDKAVYLAEMTEMLLQVINGEREPHDKDHYANKRLRVSGDLMEDLFRVAFTS
LTRDMTYQLERSLSRGKEPSVKQAVRSDVITENIKHAIATGNWVGGRAGVSQLLDRTSYM
GTLSHLKRVVSPLSRSQPHFEARDLHPTQFGKICPNETPEGPNCGLVKNLAIVTKISEGY
PLKDIEKDIKALDHITPLDHNLE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaacgcatggtcattggttgattcattctttgatgaatacgatatagttgat
catcatatacgttcatacaatgatttcctagataataagattcaggaaattgttgacata
acagaacctataacacttgatcatggtgaatacactattaagacaggaaatgttgaaata
gtcaaaccatacatcagagaagcagatggatcaaaaagtatcattgaacctgcagaagca
agattaagaaatcttaattattctgctcatatgtatcttgacatggctcttgtaaaaggg
gatagtgaagattacgaaatggaaaaagtttacataggtgaactacctgtcatgctcaaa
tcaaaggcatgtcacctctgtggactaaacgatgaagaattagaaaatgtgggtgaagat
ccacaggaccctggaggatacttcatagtaaacggttcagaaagagcaatagtaactatg
gaggaaattgctccaaacaaaatcatacttgaacaaagtgaaaaagacaaagctgaccgt
agagcacgcgctgttgttacttcaataaaaagtgggttccgtgcaagaatcacattagaa
tacagaaaacctcataaaaaaggagtattcctaagaatatcattcccatatgttcctggt
gaaataccactcgtaattttattaagggcattaggatttgaaaaagatgtggatcttgtt
aacagtgtatccgaggatattaacactcaattcctcttaattgacgatatccagaccact
ggtattaacacacaatatgatgctgttaaatacattggtaacagagtagcaaaaggtatg
accgaggaatacaggattaaacgtgcagaagacgttattgaccgttacctcttaccacac
gtaggagtagatcctgaagaccgtatcgacaaagcagtataccttgcagaaatgacagaa
atgctcttacaagtaattaatggagaacgtgaaccacacgataaggaccactacgcaaat
aaaagattaagagtatccggagaccttatggaagaccttttcagagtagctttcacaagc
cttacccgtgacatgacttatcagctagaacgtagcctttcacgtggaaaagaaccatcc
gttaaacaagcagtaagaagtgatgtaatcacagaaaacattaaacacgcaatagctact
ggtaactgggtaggtggacgagcaggggtcagtcaattacttgaccgtacaagttacatg
ggaacactttcacaccttaaacgtgtagtatccccattatcaagaagtcaacctcacttt
gaagcaagagatttacatccaacacagtttggaaaaatatgtcctaacgaaacaccggaa
ggaccaaactgtgggctggtaaaaaacctggctatagtaacaaaaatatctgaaggatat
ccgttaaaagatattgagaaagatattaaagcattagatcatataacaccattagatcat
aacttagaatag
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