Methanosphaera sp. ISO3-F5: PXD04_03490
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Entry
PXD04_03490 CDS
T09686
Name
(GenBank) RNA polymerase Rpb4 family protein
KO
K03051
DNA-directed RNA polymerase subunit F [EC:
2.7.7.6
]
Organism
meis
Methanosphaera sp. ISO3-F5
Pathway
meis03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
meis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PXD04_03490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meis03021
]
PXD04_03490
Enzymes [BR:
meis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PXD04_03490
Transcription machinery [BR:
meis03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
PXD04_03490
BRITE hierarchy
Motif
Pfam:
RNA_pol_Rpb4
T4_baseplate
DUF1507
Seadorna_VP6
Motif
Other DBs
NCBI-ProteinID:
WQH64862
LinkDB
All DBs
Position
2469399..2469761
Genome browser
AA seq
120 aa
AA seq
DB search
MMIGKKVIDTKPITISEAREILMKKVEEKADENNEVDGRQFTYEQNLTIDYVNKFALLDA
EDAKELVSKLEEYLTTVQAVKVVDLMPEDLDDLRLIFAKERGTFETETLQNVLDLLDQYR
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgatgattggaaaaaaagtcattgatacaaaacctattacaatatctgaagcaagagaa
attctaatgaaaaaagtagaagaaaaagctgatgagaataacgaagtcgatggccgccaa
tttacatatgaacaaaaccttactattgattatgtcaataagtttgcacttcttgatgct
gaagatgctaaagagttagtttcaaaacttgaagagtatcttacaactgttcaagcagtg
aaagtagtggatttgatgccagaggatcttgatgacttaagattaatctttgcaaaagaa
aggggaacttttgaaacagaaactttacaaaatgttctagatttattggatcaataccga
taa
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