Methanosphaera sp. ISO3-F5: PXD04_05025
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Entry
PXD04_05025 CDS
T09686
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
meis
Methanosphaera sp. ISO3-F5
Pathway
meis00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
meis00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PXD04_05025 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
meis01007
]
PXD04_05025 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meis03016
]
PXD04_05025 (lysS)
Enzymes [BR:
meis01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PXD04_05025 (lysS)
Amino acid related enzymes [BR:
meis01007
]
Aminoacyl-tRNA synthetase
Class I (A)
PXD04_05025 (lysS)
Transfer RNA biogenesis [BR:
meis03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PXD04_05025 (lysS)
BRITE hierarchy
Motif
Pfam:
tRNA-synt_1f
Anticodon_2
tRNA-synt_1g
tRNA-synt_1e
DUF2387
Motif
Other DBs
NCBI-ProteinID:
WQH65146
LinkDB
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Position
complement(284313..285902)
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AA seq
529 aa
AA seq
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MSKHWTERIAEELSKEGRDEYVIGSGTSISGSVHIGNSCDVFIANAVSKELRKLGENART
LWIADDYDPLRKVPYPLPESYDKYLGQPYYEIPCPEGCCDNFVEHFQKPFTSALESFDIQ
DLEIKSGAYMYKNGFYTEATKIALENAERIREIFNQYREHPLKDNWLPYNPICSECGRVN
TTEAYDYDGTTIKYKCECGHEGEMDYTTGKGKLTWRVEWAARWKILNITCEPFGKDHAAS
GGSYDVSKIISEEIFDYPAPYPVPYEWITLDGDAMSKSKGVFFSPEAWLKIGKPETLNYF
IFRNKPLKPKDFSPKMGFLDLMDQYDRVERIAYGIEEASNEKEKEKLTKIYEISQINELP
DEMPFQPAYRFLTVAYQVASGKSDKIYEILKNNHQLPSRLEDVSYDNLSEWDKNTFLQRL
EYVNNWLEIYAPKFVKFQVMKKLPRIEINDEQKEFLRQLADVLENETFDNDVEFHDRMYE
VLEALGMKPQKAFQAIYKTILGKKQGPRAASFVLSLDKDFAIKRFRLEE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacattggactgaaagaattgctgaagaattaagtaaagaaggaagagatgaa
tacgtaattggaagtggaacttcaatatctgggtcagtacatataggtaatagttgtgac
gtgttcattgcaaatgctgtaagtaaagaattaagaaaattaggtgaaaatgcaagaaca
ctgtggatagctgatgattatgatcctctaagaaaagtaccttaccctttaccagaatca
tatgacaaatacctcggacaaccttactatgaaattccatgtcctgaaggttgttgtgac
aattttgttgaacatttccaaaaaccatttacttctgctttagaatcttttgatattcaa
gatcttgaaattaaaagtggagcatatatgtataaaaatggattttatactgaagctaca
aaaattgcattagaaaatgcagaacgtattagagaaatattcaatcaatatcgtgaacat
ccacttaaagataattggttaccatataatcctatttgtagtgaatgtggaagagttaat
actacagaagcttatgactatgatggaactaccataaaatataaatgtgaatgtggtcat
gaaggagaaatggattatactacaggtaaaggtaaattaacatggagagtagaatgggct
gcaagatggaaaatattaaatattacctgtgaaccattcggtaaagaccatgcagctagt
ggtggatcatatgatgttagtaaaatcatatccgaggagatatttgattatcctgcacca
tatccagtaccatatgaatggataacacttgatggtgatgctatgagcaaatcaaaaggt
gtgttctttagtccagaggcttggctgaaaataggaaaacctgaaactttaaattatttc
atattcagaaataaaccattgaaacctaaagatttttcacctaaaatgggatttttagat
ttgatggatcagtatgatagagtagaaagaattgcatatggaatagaagaagcaagtaat
gaaaaagaaaaagaaaaacttactaaaatatatgaaatatcccaaattaatgaattacct
gatgaaatgccattccaaccagcatacagattcttaacagtagcttatcaagttgctagt
ggtaaatccgataagatttatgaaattcttaaaaataatcatcagttaccttcaagatta
gaagatgtgagttatgataatttaagtgaatgggataaaaatacatttttacaaaggtta
gaatatgttaacaattggttagagatttatgctcctaaatttgttaaattccaagttatg
aagaaattacctcgtattgaaattaatgatgaacaaaaagagtttttaagacagttggct
gatgttttagaaaatgaaacttttgataatgatgttgaattccatgatcgtatgtatgaa
gttcttgaagctctgggtatgaagcctcaaaaagctttccaagctatttataaaacaatt
ttgggtaaaaaacagggtcctcgtgcagcttcatttgtattatctttagataaggatttt
gcaattaaaaggttcagacttgaagaataa
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