Methanosarcina sp. Kolksee: MSKOL_0628
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Entry
MSKOL_0628 CDS
T03821
Name
(GenBank) DNA-directed RNA polymerase subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSKOL_0628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mek03021
]
MSKOL_0628
Enzymes [BR:
mek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSKOL_0628
Transcription machinery [BR:
mek03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSKOL_0628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
DUF826
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AKB46405
UniProt:
A0A0E3QB47
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All DBs
Position
781444..782028
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AA seq
194 aa
AA seq
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MYKMMKLVDTVRIPPTLLGEEVTQTVKNALREKLEGQVDKKLGSLVAICKIVEIGEGHIL
VGDGAVYYDVTFEAIMFVPELQEIIEGEVVEAVGFGVFVGMGPMDGLLHVSQITDDFISY
DAKNARLVTKNGGKSIAEGDHVRARVVAVSINEREPKESKIGLTMRQTALGKLQWLEEAR
IKKQSNEAVPEGTV
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaatgatgaagctcgttgatacggtccgtatccctccgacccttttaggggaa
gaggtgacgcaaactgttaaaaacgcgttaagagaaaaactcgaggggcaggttgacaaa
aaacttggttctctcgttgctatttgcaagatagtcgagataggggaagggcatatcctc
gtaggagatggggcagtatattacgatgttacattcgaggcaataatgttcgtgcctgag
ctccaggagattattgagggcgaagttgttgaagccgttggttttggagttttcgtaggg
atgggaccaatggacggcttacttcacgtcagccagattacggacgattttatttcatac
gacgccaaaaatgcaaggcttgtgacaaagaacggaggcaaatccattgctgaaggtgac
catgtaagggccagggttgtcgctgtaagcatcaacgagagagagcctaaagagagtaaa
ataggccttactatgcgtcagactgctcttggaaagttgcagtggcttgaggaagcccgt
ataaagaaacagtccaatgaagctgttcctgaaggaactgtctga
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