Methanosarcina sp. Kolksee: MSKOL_0829
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Entry
MSKOL_0829 CDS
T03821
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSKOL_0829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mek03021
]
MSKOL_0829
Enzymes [BR:
mek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSKOL_0829
Transcription machinery [BR:
mek03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSKOL_0829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Fer4_7
Fer4_9
Fer4
Fer4_16
Fer4_8
Fer4_10
Fer4_6
Fer4_21
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
AKB46606
UniProt:
A0A0E3LIU0
LinkDB
All DBs
Position
complement(1052826..1053626)
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AA seq
266 aa
AA seq
DB search
MTMEVDILELSDRSAKFVLSKVSTSFANGIRRAMVADVPTLAIEYVNLYDNTSVLYDEQL
ALRLSLIPLVTDVETYVPQAECDVCGGEGCPACEVSLTLSAEGPCTVYSRDLISSDPKIQ
PADLNIPIVELKKGQKLVLEALAHMGYGRDSVKWQAGVACGYKNVPIITITNCDACGHCA
TECPKGIIRFEESGARVSDEDILKCSLCKLCEQVCDIHAINISFDENAFVFTMESDGSYT
AKDLALNASNVVKGRAEELLSILDQF
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggaagtagacattctggagttatcggatagatctgcaaaattcgtgctttca
aaagttagcacatcttttgccaacggcattcggcgcgctatggtcgcagatgtaccaacg
cttgcgattgaatatgtgaatctttacgacaatacatcggtactctatgatgagcaactg
gctctacgtctgtccttaatcccgcttgttacggatgtagagacgtatgtgccacaggca
gaatgcgatgtctgcggaggagagggctgtcctgcctgcgaggtttccttaaccctgagt
gcagaaggtccgtgcacggtttattcacgggatcttatatcctctgacccgaagatacag
cctgctgatctcaatatcccgattgttgaactgaaaaaagggcagaaacttgtgcttgag
gctctcgctcatatgggctacggcagggatagtgttaaatggcaggcaggagtcgcttgc
ggctacaagaacgtgcctattataaccattacaaactgtgatgcatgcgggcactgtgca
accgaatgtccgaaaggcattatacggtttgaagaatcaggtgccagagtttctgacgag
gatatcctgaagtgctcactctgcaagctctgcgagcaggtctgtgacatccacgcaata
aacattagcttcgatgagaacgcttttgtatttacaatggagtccgatggttcttacaca
gccaaagatcttgcccttaatgcgtcaaatgtggtcaaaggcagagctgaagaacttttg
agcattctggaccagttctga
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