Methanosarcina sp. Kolksee: MSKOL_1358
Help
Entry
MSKOL_1358 CDS
T03821
Name
(GenBank) tRNA S(4)U 4-thiouridine synthase (former ThiI)
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek00730
Thiamine metabolism
mek01100
Metabolic pathways
mek01240
Biosynthesis of cofactors
mek04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
MSKOL_1358
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
MSKOL_1358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mek03016
]
MSKOL_1358
Enzymes [BR:
mek01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
MSKOL_1358
Transfer RNA biogenesis [BR:
mek03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
MSKOL_1358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AKB47135
UniProt:
A0A0E3QDE6
LinkDB
All DBs
Position
complement(1742874..1744166)
Genome browser
AA seq
430 aa
AA seq
DB search
MVKEKIESRIRTHQENKHTPDNDTRKLDFSDSEFSCSEYGIKTEVVIVRYGELALKSTGV
RNWYEKILMRNIAAMLDSRNIPYSQIRREWGRIFIESADPCAAEAASDVFGIVSTSPALT
AEPTLESAASVCAALARDLVLEGESFAIRARRSGNHTFSSADIGKNCGDAVWNELEKEGK
HPRVNLSSPDKEIFVEMRQNLAYVYLKTFKGVGGLPLGTQGSMVVLMSGGLDSPVAAWLM
MKRGVMITPVYCSNSPYAEDAARERAFDCIRQLQKWAPGHQFTTYEIPHGPNLKAFIDIC
NRKNTCLLCKRMMYREAYEVMIKEGANGIITGSSLGQVASQTAANMYAEIYQLAIPIYHP
LIALDKTEIMDITRKIGTYDISNRSAGSCTAVPERPEIGAKYDLIVLEERKMDIETMVSN
AMKGAKTFKL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagaaaaaattgaatctcgcattcgtactcatcaggaaaataaacacactcca
gataatgatacaagaaaactggatttttcggattcagaattctcttgttccgagtatgga
attaagacagaagtagttatagtccggtatggtgaactcgctcttaaaagtaccggagtc
cgaaattggtacgagaaaatccttatgaggaacattgccgcaatgcttgactcaagaaac
attccctattctcagatccggcgggaatggggcaggatctttatcgagagtgcggatcca
tgtgcagccgaagccgcatctgatgtttttgggattgtctcaacgtctcctgcattgaca
gcagagcctactcttgagagtgcagccagtgtatgtgctgccctcgccagggatcttgtt
ttagaaggagagtcttttgctatcagagcccgaagaagtggaaaccatactttttcttcg
gcagacatagggaaaaactgtggggatgctgtttggaatgaactggaaaaagaaggaaaa
catcccagagttaacctgagttctcctgataaggaaatttttgttgaaatgaggcagaac
ctggcttacgtctatctaaaaacatttaaaggagtagggggtcttcctctcggcacgcag
ggtagtatggtagttttaatgtctggcgggcttgactctcctgttgcagcatggcttatg
atgaagcgtggcgtaatgattacacctgtttattgcagtaactctccttatgcagaagac
gcggcaagagagcgtgcttttgactgcatccggcagctccaaaaatgggctccaggacat
cagtttacgacttatgaaattcctcacggtcccaatctcaaggcttttatagacatttgc
aaccgaaaaaatacctgtcttctctgcaaacgcatgatgtacagggaagcctatgaggtt
atgataaaagaaggtgcaaacggaattatcaccggttcttccctgggacaggtagcttcc
cagactgctgcaaatatgtatgctgaaatctatcagcttgctatcccgatttatcaccct
ttgattgcgttagacaaaactgaaatcatggatattacccgcaagattgggacctacgat
atctccaatagatcagcaggtagctgtactgctgtccccgagcgtcctgaaataggggca
aaatacgaccttatcgtacttgaggaaagaaaaatggatatcgagactatggtttccaat
gctatgaaaggagcaaaaacgtttaagctctga
DBGET
integrated database retrieval system
