Methanobacterium lacus: Metbo_2398
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Entry
Metbo_2398 CDS
T01437
Name
(GenBank) RNA polymerase beta subunit
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
mel
Methanobacterium lacus
Pathway
mel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Metbo_2398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mel03021
]
Metbo_2398
Enzymes [BR:
mel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Metbo_2398
Transcription machinery [BR:
mel03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Metbo_2398
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
tRNA-synt_2
Motif
Other DBs
NCBI-ProteinID:
ADZ10611
UniProt:
F0T6H7
LinkDB
All DBs
Position
complement(2440648..2442150)
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AA seq
500 aa
AA seq
DB search
MVKNAWKLVDAFFDEYNLVDHHIKSYNDFVNHRIQDIIDITEPIVLEQGEYTIKTGNVEI
KKPFIKEADGSNSKIFPTEARLRNLTYSAHMYLEMALTKKGDEEQEMENVYIGELPVMLK
SNICHLNGLSEEEIDDVGEDPQDPGGYFIVNGSERAIVTMEEIAPNKIILERIGELEDRR
ARAIVTSIKSGFRARITLEYRKPRKKGVFLRISFPYVPGEIPLVVLLRALGFETDQDLIT
SVSDENDIQFLLIDDIQTSEIMTQYDAIKYIGNRVAKGMTEEYRIKRAEDVIDKYLLPHI
GVDPSQRAEKATYLAEMTEMLLQVIFETREPHDKDHYANKRLRVSGDLMEDLFRVAFTSL
TRDMTYQLERSLARGKEPSVKQAVRSDVLTENIKHAIATGNWVGGRAGVSQLLDRTSYMG
TLSHLKRVVSPLSRSQPHFEARDLHPTQFGKICPNETPEGPNCGLVKNLAILSKISEGSD
PEELEEIIKKMGVIKPVQTL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaaatgcatggaaactggttgatgcattttttgatgaatacaacttggtagac
caccacatcaaatcctacaacgactttgtcaatcatagaatacaagatataatcgatata
acagagccaattgttcttgaacaaggtgaatacactattaaaacagggaatgtagagatc
aaaaagcctttcattaaagaggcagacggatcaaacagtaaaattttccctaccgaagca
agactaagaaacctgacatactctgcacacatgtatcttgaaatggcattgaccaaaaag
ggtgatgaagaacaggaaatggagaatgtttacatcggtgaactaccagtgatgttgaaa
tcaaatatttgtcatctcaatggtttgagtgaagaggaaatagatgatgttggcgaagat
cctcaagatcctggaggatacttcatagtgaatggttcagaaagagccattgttaccatg
gaagagatcgcacccaacaagatcatcctcgaaaggattggcgaattagaagataggcgt
gcaagagccattgtcacttcgataaaaagtggatttagagcccgtatcaccctagaatac
agaaaacctcgtaaaaagggcgtatttttaagaatatctttcccatatgtgcctggagaa
ataccattggtagtacttttaagggcccttggatttgaaactgatcaagatctcatcacc
agcgtatcagatgaaaacgacatacagttccttctcatcgatgatatacagacctctgaa
ataatgacccagtacgatgcaataaagtacatcggaaacagggttgctaaaggcatgacc
gaggagtataggattaagagggctgaagatgttatagataaatatctactacctcatatc
ggtgttgatccaagtcaaagagctgaaaaagcaacttatctggctgaaatgactgaaatg
ctccttcaagtaattttcgaaacaagagaacctcatgataaggaccactacgccaacaag
aggctgagggtatcaggcgatctgatggaggaccttttcagagtagctttcaccagttta
acaagggacatgacctatcagctcgagagaagcttggccagaggtaaagaaccatccgta
aaacaagctgttcgttctgatgttctgacagagaacattaaacatgcaatagccactgga
aattgggttggtgggcgtgcaggtgtaagccagctattggacagaacaagttacatggga
acattatcacacctgaaaagggttgtatccccattaagcagaagtcagcctcattttgaa
gctcgtgatttgcacccaacacagttcggtaagatatgcccaaacgaaacaccagagggt
ccaaactgtggactggttaagaaccttgcaattttatcaaaaatatccgaaggttcagat
ccagaggaacttgaagaaataatcaaaaaaatgggagttataaagcctgtacaaacttta
taa
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