Candidatus Methanoliparum sp. LAM-1: MTLP_13080
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Entry
MTLP_13080 CDS
T07692
Name
(GenBank) cytidine deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
melu
Candidatus Methanoliparum sp. LAM-1
Pathway
melu00240
Pyrimidine metabolism
melu01100
Metabolic pathways
melu01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
melu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
MTLP_13080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
melu02044
]
MTLP_13080
Enzymes [BR:
melu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
MTLP_13080
Secretion system [BR:
melu02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
MTLP_13080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC_N
NAD1
APOBEC3
Motif
Other DBs
NCBI-ProteinID:
BDC36626
LinkDB
All DBs
Position
complement(1220833..1221324)
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AA seq
163 aa
AA seq
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MNERPNIDEYFMNIAKIVATRSTCLRNHVGAVIVKDKRILTTGYNGAPSGLPHCLDIGCL
RNSNNIPSGKNQEICRGVHAEQNAIIQAALHGISIKDATLYCTHLPCSLCAKMLINAHIK
RVVYSISYPDEMSLEYFNKAGISVELYKGDITNQRFVNHESDS
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagagacctaatatagatgaatattttatgaatatagcaaagattgttgctaca
agatctacatgcctgagaaatcatgtaggtgctgttatcgtcaaagataaaaggattctt
accacaggttacaacggcgcaccgagtggtttaccacattgtctggatatcggttgttta
aggaattctaataatattccatccggaaaaaaccaagaaatctgtagaggtgtacatgca
gaacaaaatgctattatccaagcagctcttcatggaataagcataaaagatgccacttta
tattgtacccatctcccgtgcagtctttgtgcaaagatgctgataaatgcccatattaag
cgggttgtatattccatatcatatccggatgaaatgagtctagaatattttaacaaagca
ggtatatctgtagagttatataaaggggatattacaaatcagagatttgtaaaccacgaa
tcggattcatga
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