Micromonospora endophytica: Jiend_12600
Help
Entry
Jiend_12600 CDS
T08807
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
meno
Micromonospora endophytica
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
meno03009
]
Jiend_12600 (rimO)
Enzymes [BR:
meno01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Jiend_12600 (rimO)
Ribosome biogenesis [BR:
meno03009
]
Prokaryotic type
ribosomal protein modification factors
Jiend_12600 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Phage_BR0599
TraT
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BCJ57838
LinkDB
All DBs
Position
complement(1295249..1296769)
Genome browser
AA seq
506 aa
AA seq
DB search
MVSATSPYDHSGPASPAESPDHGRRVALLTLGCARNEVDSEELAARLHADGWQVTTDGEG
ADIVVVNTCGFVEKAKQDSIQTLLAAADTGAKVVAAGCMAERYGRELADSLPEAQAVLSF
DDYPEISARLDAVVAGREVSAHTPRDRRQLLPLTPVARRDSTVSLPGHGSAAEVDEHTPA
HLRTVLRRRLDTGPVASLKLASGCDRRCAFCAIPAFRGAFVSRTPDELLAEAEWLAKSGV
RELVLVSENSTSYGKDLGDPRALEKLLPQLAVIDGIVRVRVSYLQPAETRPGLVEAIATT
PGVAPYFDLSFQHSSEPVLRRMRRFGSTDRFLELLAGARALAPEAGARSNFIVGFPGETR
ADVDELVRFLTEARLDAIGVFDYSDEDGTEAAGLSGKVSAATVKRRYDKLSALADELCSQ
RAEERLGATVEVLVDSVDGAIVEGRAAHQAPEVDGSTTLVAPVGGGVDLAALRPGDLVRA
TVTGTEGVDLIAVPDEMISAAPGAAR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgccacctccccttacgaccactccggcccggcgtccccggcggagtcgccc
gaccacggccgtcgggtcgccctgctgaccctcggctgtgcccgcaacgaggtcgactcg
gaggaactggccgcccgcctgcacgccgacggctggcaggtgacaacggacggcgagggc
gccgacatcgtggtggtcaacacctgcggcttcgtggagaaggccaagcaggactccatc
cagacgctgctggccgccgccgacaccggcgcgaaggtggtcgccgccggctgcatggcc
gagcggtacggccgggagctggccgacagcctccccgaggcccaggcggtgctcagcttc
gacgactacccggagatctccgcccggctggacgcggtcgtcgccggccgtgaggtcagc
gcgcacacccctcgggaccggcggcaactgctgccgctgaccccggtggcccgccgggac
agcacggtgtcgctgccggggcacggcagcgccgccgaggtcgacgagcacacccccgcg
cacctgcgcacggtgctgcgccgtcggctggacaccggcccggtcgcctcgctcaagctg
gccagcggctgtgatcggcgctgcgccttctgcgccatccccgccttccgtggcgccttc
gtctcgcgtacccccgacgaactgctcgccgaggccgagtggctggccaagagcggcgtc
cgggagctggtcctggtcagcgagaactccacctcgtacggcaaggacctgggcgaccct
cgcgcactggagaaactgctgccgcagctcgcggtgatcgacggcatcgtccgggtccgg
gtcagctacctccagccggccgagacccgacccggcctggtcgaggcgatcgccaccacg
ccaggcgtggcaccctacttcgacctgtcgttccagcactccagcgagccggtgctgcgc
cggatgcgccgattcggctccaccgaccggttcctggagctgctggccggcgcccgggcg
ctggccccggaggcgggcgcgcggagcaacttcatcgtcgggttccccggcgagacccgc
gctgacgtcgacgagctggtccgcttcctcaccgaggcccgactcgacgcgataggcgtc
ttcgactacagcgacgaggacggcaccgaggccgccgggctgtccggcaaggtctccgcc
gccaccgtcaagcgccggtacgacaagctcagcgcgctcgccgacgagctgtgctcgcag
cgcgccgaggagcgtctcggcgcgacggtggaggtgctcgtcgactcggtcgacggtgcg
atcgtcgagggacgggccgcgcaccaggcaccggaggtggacggctcgaccacgcttgtc
gcgccggtcggcggcggggtcgacctggccgcgttgcgccctggtgacctggtgcgggcc
actgtgaccggcaccgagggcgtcgacctgatcgcggtgccggatgagatgatctcggcg
gcgcccggcgcggcacggtga
DBGET
integrated database retrieval system
