Massilia endophytica: LSQ66_07480
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Entry
LSQ66_07480 CDS
T09693
Name
(GenBank) MFS transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meny02000
]
LSQ66_07480
01504 Antimicrobial resistance genes [BR:
meny01504
]
LSQ66_07480
Transporters [BR:
meny02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
LSQ66_07480
Antimicrobial resistance genes [BR:
meny01504
]
Gene variants
Tetracycline resistance genes
Transporters
LSQ66_07480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
LacY_symp
CorA
Motif
Other DBs
NCBI-ProteinID:
UGQ48297
LinkDB
All DBs
Position
complement(1652709..1653962)
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AA seq
417 aa
AA seq
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MSDSSIESTPVTATAAPPTGNLKFILVCIFIDMLGIGLIVPVLPLLVGEFVAARDQQTMW
YGILGATFGLMQFIFMPMLGAISDRVGRRPVLLYSMAGMSLNFLATAWAPNLACLFIGRL
IGGASSASMSVASAYASDISTHENRAKSFGKIGAAFGLGFIAGPMLGGLLGGVNLHLPFY
AAAALSAANCIYGYFFVPESLPQAQRGSFKLTRVNPLAGLIRLSRRKDIRGLVIVFALFS
CAQLMLHSTWVLYTHFRFDWTPAQNGLAMFCVGVASVVVQAGLLGKFIKWFGEVRLSLLG
LASGCITYLLYGLATQGWMMYVLILCNLLAFAAGPALQGIISKSTPPTEQGELMGSLQSI
SSVGIIFMPLVGGFLLGEVSHLPPNDWRIGATFFVSAAMQAVAIIVARRYFKSHHLH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattccagcatcgaaagcaccccggttaccgccacggcggcgcctcccacgggc
aacctgaaattcatcctcgtctgcatcttcatcgacatgctcggcatcggccttattgtg
ccggtgctgccgctgctggtgggcgagttcgtcgccgcgcgcgaccagcagaccatgtgg
tacggcatcctgggcgccaccttcggcctgatgcagttcatcttcatgcccatgctgggc
gccatcagcgaccgcgtggggcgccgccccgtgctgctgtactccatggcgggcatgagc
ctcaacttcctggccacggcgtgggcgcccaatcttgcctgcctgttcatcggacgcctg
atcggcggcgcctcctcggccagcatgtccgtggcctcggcctatgcgtcggacatctcc
acccacgaaaaccgtgccaagagcttcggcaagatcggcgcggccttcggcctgggcttc
atcgccgggccgatgctgggcggcctgctgggcggcgtcaacctgcacctgcccttctac
gcggcggcggcgctgtcggcggccaactgcatctacggctacttcttcgtgcccgaatcc
ctgccccaggcgcagcgcggcagcttcaagctcacgcgggtcaatccgctggcggggctg
atccgcctgtcgcggcgcaaggacatccgcggcctcgtgatcgtgttcgccctgttcagc
tgcgcgcagctcatgctgcacagcacctgggtgctctatacccacttccgcttcgactgg
acgccggcgcagaacggcctggccatgttctgcgtgggcgtggcgtcggtggtggtgcag
gccgggctgctgggcaagttcatcaaatggtttggcgaggtgcgcctgtccctgctgggg
ctggcctccggctgcatcacctacctgctgtacggtctggcgacgcaggggtggatgatg
tacgtgctcatcctttgcaacctgctggcgttcgcggcggggccggcgctgcagggcatc
atttcaaaatccacgccaccgaccgagcagggcgagctgatgggctccttgcaatcgatc
agcagcgtgggcatcatcttcatgccgctggtaggcggtttcctgctgggcgaggtcagc
catttgccgccaaacgactggcgcatcggcgccaccttctttgtctcggccgcgatgcaa
gccgtagccatcatcgtcgcccgccgctacttcaagagccaccacctccattaa
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