Massilia endophytica: LSQ66_24400
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Entry
LSQ66_24400 CDS
T09693
Symbol
mnmC
Name
(GenBank) FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meny03016
]
LSQ66_24400 (mnmC)
Enzymes [BR:
meny01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
LSQ66_24400 (mnmC)
Transfer RNA biogenesis [BR:
meny03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LSQ66_24400 (mnmC)
BRITE hierarchy
Motif
Pfam:
DAO
NAD_binding_9
NAD_binding_8
FAD_binding_3
Methyltransf_30
FAD_binding_2
Pyr_redox_2
Pyr_redox
3HCDH_N
TrkA_N
HI0933_like
GIDA
FAD_oxidored
Epimerase
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
UGQ46863
LinkDB
All DBs
Position
5323737..5325410
Genome browser
AA seq
557 aa
AA seq
DB search
MQSASASLRKVVLDLAFGQGEHFARARKERRADETLHYIAPAPSMPPPCAPGWPSAVPGM
HRLHLDGGAVTLDLLIGDQASALGEIAARADHFIVDGPVPQPRLLGRLAAPGATLQARSP
DDATLRALRSAGFAWPEQQDEWLHAVYASRRPQAPAAPPPSRRAIVVGAGLAGAAACERL
CARGWEVTLVERHGQAAQEASGNRAGIFMPLLSKDDNIPTRLTRAAYLYAMRRWQALGGF
GGAMQGAQCGVLQLARDAEHAQLQEELVKQWNYPPEFVRWLDPQAASAVLGSATPSGAWL
FPQGGWANPASICRAMLEACGGRLQRRFHSEAVRIERRGGEWAVLDAGGRVLAQAPDLVL
ANGAGALALPPTAPLPLYTMRGQVTHLPDQRFPALPMVVCREAYMTPPVDGIVSVGATYD
SDGERALRASSQEENLARAEEILSPGRLAPHRLDEAPLAGRVGFRCMAPDRLPLAGTLPD
YGAHGRPERLRDVPRHPGLHCLLGYASRGLIWAPLMAELLASQLEGEPLPLEAGLAAALD
PARFLLKDRRRSVAATP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgcaagcgcctcgcttagaaaggtggtgctcgacctggcgttcggccagggc
gaacacttcgcgcgcgcccgcaaggaaagaagggccgatgaaaccttgcactacattgcg
cccgcgccatccatgcccccaccctgcgcccccggctggcccagcgccgtgccgggcatg
caccgcctgcatctcgatggcggcgccgtcacgctggacctgctgatcggcgaccaagcc
agtgcgctgggagaaatcgccgcgcgcgccgatcatttcattgtggatgggccggtgccg
caaccgcgccttctggggcggcttgcggcgcccggcgccacccttcaggcgcgctcgccg
gacgacgcaacgctgcgcgccctgcgcagcgcgggctttgcctggccggagcagcaggac
gagtggctgcatgccgtctacgccagccggcgcccgcaggcgcctgccgctccgccgcca
tcgcgccgcgccatcgtcgtcggtgcaggcctggcgggcgccgcggcctgcgagcgcctg
tgcgcgcgcggctgggaagtcaccctggtcgaacgccacgggcaggccgcacaggaggcc
tccggcaaccgcgcgggcatcttcatgcccctgctgtcgaaggacgacaatattcccacc
cgcctcacgcgcgccgcctacctgtacgccatgcgccgctggcaggccctgggcggcttc
ggtggcgcaatgcagggcgcccagtgcggcgtgctgcagctggcgcgggacgcggaacac
gcgcagctgcaggaggaactggtgaagcagtggaactatccgccggagttcgtgcggtgg
ctggacccgcaggccgccagcgccgttctcggttcggccacgccgtccggcgcatggctg
ttcccgcaaggcggatgggccaatcccgcatccatctgccgcgccatgctggaagcctgc
ggtgggcgcctgcaaaggcgcttccattccgaagccgtgcgcatcgaaaggcgcggcggc
gaatgggctgtgctggatgccggaggccgcgtgctcgcccaggcgccggacctggttctc
gccaacggagccggtgcgctggcgctgccgcccaccgctccgcttcccctgtataccatg
cgcggacaggtcacgcacctgccggaccagcgcttcccggccctgcccatggtggtgtgc
cgcgaggcgtacatgacgccgcctgtagatggcatcgtcagcgttggcgccacttacgac
agcgacggcgagcgcgcactgcgcgcgtcgagccaggaagagaacctggcgcgcgccgaa
gagatcctctcgccaggccgcctcgcgccgcaccggctggacgaagcgccgctggcgggc
cgggtgggcttccgctgcatggcgcccgaccgccttccattggccggaacgctgcccgac
tacggcgcgcacggcaggcccgaacgcctgcgcgatgtgccgcgccacccgggcctgcat
tgtcttcttggctacgcttcccgcggcctgatctgggcgcccttgatggccgagctgctg
gccagccagctggaaggggagccgctgccgctcgaagcgggccttgcggccgcgctcgac
ccggcccggtttttgttaaaagaccggcgccggagtgtggcggccacgccatag
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