Methanosarcina sp. WWM596: MSWHS_2914
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Entry
MSWHS_2914 CDS
T03852
Name
(GenBank) DNA-directed RNA polymerase subunit B''
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
meq
Methanosarcina sp. WWM596
Pathway
meq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
meq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSWHS_2914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meq03021
]
MSWHS_2914
Enzymes [BR:
meq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSWHS_2914
Transcription machinery [BR:
meq03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSWHS_2914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-ProteinID:
AKB19777
UniProt:
A0A0E3NMW2
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All DBs
Position
3547902..3549497
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AA seq
531 aa
AA seq
DB search
MQHHIDSFNKFIDYGLQKIIDEQRIIETDIEDTFLKLGKIRVEHPVVKEADGAIEKLYPN
EGRLRNLSYSGPLYLEMSVVKEGIESDVLEAKIGQLPIMVKSKICNLLGLNDAEKVRYGE
DPLDPGGYFIIGGTERVVMTLEDLAPNKILVEYGERYGDSIEVAKVFSQKRGYRALVIVE
RGRKSLLEVSFPSISGRVYFITLMRALGIVTDEDIVNAVSSDPEIIKFMLENLEEAEVET
QEEAIEKIGARVAAGQAKEYQIKRANYVIDRYLFPHLGNDIKDRTSKAHFLARMAESCFE
LALGKRTEDDKDHYANKRLKLAGDLMEDLFRVSFNRLARDIKYQLERANMRNRELNVATI
VRADVLTDRLQHPLATGNWVGGRTGVSQLLDRNDYISTLSHLRRVISPLSRAQPHFEARD
LHATQWGRLCPSETPEGPNCGLVKNFAQMVELSTGIEEIESIKKILYDVNVEKVVVKAPE
IPARIKEILLDEFGEEIVEEFEETPEPETKYKDDDFYDYSDVDDSGSLFGD
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcaccatatagactcatttaacaagtttatagattacgggctgcaaaaaataatt
gatgaacagaggataatagaaacagacattgaagacacctttcttaaactcggcaagatc
cgggtagagcatccggtggtaaaggaggcagacggggcaatcgaaaagctttatcccaac
gaaggaaggctcaggaacctctcttattcaggccctctctatttggagatgagtgtcgta
aaagaagggatagagtccgacgtactggaggcaaaaatcgggcagctccctattatggta
aaatccaaaatctgcaaccttctcgggcttaatgatgccgaaaaagttcgctatggagaa
gaccctctggaccctggtggatatttcattatcggaggtacggaaagggtagtcatgacc
ctggaagaccttgcccctaacaaaatccttgttgagtacggagaacgttacggggactct
atagaggttgcaaaggtcttctcccagaaaagaggatacagggcactcgtaattgttgaa
agagggagaaagtctctgcttgaggtgtctttcccctcaatatccggtagagtgtacttt
attacacttatgagggcactcgggatagtaactgacgaagacatcgtaaatgcagtttca
agtgatcccgaaattatcaagttcatgctggaaaaccttgaagaagccgaagtcgaaacc
caggaagaagcaatcgagaagattggggcgagggttgctgcagggcaggccaaggagtac
cagattaaaagagcaaactacgttattgacaggtatcttttcccccacctcggaaacgac
attaaagataggacctcaaaggcccatttcctggcaagaatggctgaatcctgttttgag
cttgcacttggcaagcgtactgaagatgacaaggaccactatgcaaacaaaaggctgaaa
cttgcaggcgacctgatggaagacctcttcagggtatctttcaacaggttggcaagggac
ataaagtaccagcttgaacgcgcaaacatgagaaacagggaactgaatgtcgccactatt
gtaagggcagatgtcctgactgaccgcctgcagcaccccctggcaacaggaaactgggtt
ggaggaaggaccggtgtttcccagcttcttgaccggaatgactacatctctaccctttca
catctgcgtcgtgtaatttcaccgctttcccgtgcccagcctcactttgaagcccgagac
ctgcacgcaactcagtggggacggctctgcccttccgagactcctgaaggtccgaattgt
ggtctcgtgaaaaactttgctcagatggttgaactctctacgggaatagaggagatagag
agcattaaaaaaatactctacgacgttaatgtcgaaaaagtagttgtaaaggcgcccgaa
atcccggcgagaataaaagaaatattgctcgatgaattcggggaagagattgttgaagag
tttgaagaaactccggaacctgaaaccaaatacaaagatgatgacttctacgattattca
gatgtggacgactccggatcactgttcggggactga
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