Methanocaldococcus lauensis SG1: MLASG1_1559
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Entry
MLASG1_1559 CDS
T07808
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
mesa
Methanocaldococcus lauensis SG1
Pathway
mesa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mesa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MLASG1_1559 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesa03021
]
MLASG1_1559 (rpoD)
Enzymes [BR:
mesa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MLASG1_1559 (rpoD)
Transcription machinery [BR:
mesa03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MLASG1_1559 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
NES_C_h
Motif
Other DBs
NCBI-ProteinID:
CAB3290223
LinkDB
All DBs
Position
I:complement(1442161..1442736)
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AA seq
191 aa
AA seq
DB search
MITIKEKKKTRIGENFIFSLKAPISFSNAIRRIMISEVPTYAIEDVYIYENSSSMDDEIL
AHRLGLVPIKGKPLLENEVIKFTLEKEGPCVVYSSDLKSDNGEVAFKNIPIVKLGKGQKI
QIECDAVPGIGKIHAKWQPCNAVYKQIDEDEVEFLVETFGQMEAEEILEEAVKILKNKAE
SFLKQLEQIEE
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
ttgattacaattaaagagaagaaaaaaacaagaattggtgaaaattttattttttcttta
aaagcaccaatatctttttctaatgctattagaagaataatgatttctgaagttccaacc
tatgctattgaagacgtttatatatatgagaattcttcatcaatggatgatgaaatttta
gcacatagattgggattagttccaattaagggaaaaccattattagaaaatgaagttata
aaattcaccttagaaaaagaagggccttgtgtggtttattcatcagatttaaaatctgat
aatggagaagtagcatttaaaaatattccaattgtaaaattaggtaaaggacaaaagata
cagattgaatgtgatgcagttccaggtatcggtaaaatacatgcaaaatggcagccatgc
aatgctgtttataaacaaattgatgaagatgaagtagaatttttagtagaaacatttggt
caaatggaggctgaagaaatattagaggaggccgttaaaatattaaaaaataaggcagaa
agttttttaaaacaactggaacaaattgaggaataa
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