Methanogenium sp. S4BF: L1S32_04590
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Entry
L1S32_04590 CDS
T09590
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
mesb
Methanogenium sp. S4BF
Pathway
mesb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mesb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L1S32_04590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesb03021
]
L1S32_04590
Enzymes [BR:
mesb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L1S32_04590
Transcription machinery [BR:
mesb03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
L1S32_04590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Fer4_7
Fer4
Fer4_9
Fer4_10
Fer4_6
Fer4_4
Fer4_21
Fer4_2
Fer4_17
Fer4_16
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
WFN35400
LinkDB
All DBs
Position
complement(939980..940816)
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AA seq
278 aa
AA seq
DB search
MHLSFSRFDDDVARFVISGFSSAFVNALRRTMIGEVPTLAIEDVLIYDNNSALFDEMLAH
RLGLIPLRTDLSEYVFTKDCSCNGEGCSACTSVYTLSVEGPRVVYSRDLIPQNPRAAPVE
ENIPLVKIERDQKIVLEARAVLGRGVDHAKWQPTLACGYKAYPRIVFDSKCDGCGMCVDE
CPRDVLEIKGKSAAVVEGKIEDCTLCKLCERICIANADTWDRPAISIQTETDMFIFVVEG
DGSIPVRQILERAAKEIQTKSDSLVDVLCDISGGNVND
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcacctttcattcagcaggtttgatgatgacgtcgcccgttttgtcatttcaggcttt
tcctcggcatttgtaaatgcactcagaagaacaatgatcggggaagttcccacacttgcc
atcgaagatgtgctcatatatgacaataacagcgcactctttgatgagatgcttgctcac
cgcctggggctcattcccctgaggacagatctgagtgaatatgtgttcacaaaggactgc
tcctgtaatggtgaggggtgttcagcatgcacatctgtctatacactgagtgtagaaggg
ccgagggttgtatattcccgtgacctgattccccagaatccacgtgctgcaccggttgaa
gagaacattcccctggtcaaaattgaaagagatcagaagattgttcttgaagcgcgtgct
gtgcttggacggggtgttgaccatgcgaaatggcaacctacactcgcctgtggatataag
gcatatccgcggattgtgtttgacagcaagtgtgacggctgtggcatgtgtgtggatgaa
tgtccacgtgatgtgcttgaaataaagggaaagagtgcagcagtcgttgaaggcaaaatt
gaggactgcacactgtgcaagctttgtgagagaatctgtattgcgaatgcagatacctgg
gaccgccccgcaatctctattcagacagagactgatatgttcatctttgttgtagagggt
gatggttcgattccggtgcgtcagattcttgaacgagctgcaaaagagattcagacgaaa
tcagacagcctggtggatgttctttgcgatatatccggagggaatgtaaatgactaa
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