Methanogenium sp. S4BF: L1S32_05255
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Entry
L1S32_05255 CDS
T09590
Name
(GenBank) THUMP domain-containing protein
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
mesb
Methanogenium sp. S4BF
Pathway
mesb00730
Thiamine metabolism
mesb01100
Metabolic pathways
mesb01240
Biosynthesis of cofactors
mesb04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
mesb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
L1S32_05255
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
L1S32_05255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesb03016
]
L1S32_05255
Enzymes [BR:
mesb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
L1S32_05255
Transfer RNA biogenesis [BR:
mesb03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
L1S32_05255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
HEAT_EZ
Mtf2_C
Motif
Other DBs
NCBI-ProteinID:
WFN35512
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All DBs
Position
1079110..1080321
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AA seq
403 aa
AA seq
DB search
MEGSMEIHEAVMVRFGELFLKSEPVMKYYINTLTRNLTAAIEAEGMECSVEQHRGRIIIR
GDEPDRIAQAASRVFGIVGVSRCILTPPDREIIEETAARLAAEKLTPGMSFAVRAKRSGM
EGFSSQELGASTGARIFERCPGIRVDLTSPDYEVFAEARTFGGIVYDSQIPGPGGLPLGT
QGKFLSLLSAGLDSPVATWMMMRRGCVPVFFHCDGGRYAGADVRHTTEKNLAALSAWCPG
RTVRMTVVPLEPFYDALVASGILRTRCILCKRFMLRAAAAFALREEVAAIMTGDNIGQVA
TQTLVNLGVIQDVVPQSIPLLRPLLTYDKEEIVLRARMIGTFRDNAGDLGCAVVPKHPST
AAKPDEIREDESCIALDEILKEALAHATVVQAYNGKIIEDSSI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaagtatggagatacacgaggctgtaatggtgcgttttggtgagcttttttta
aagagcgaaccagttatgaaatactatatcaataccctgacacgaaacctgacagcagca
attgaagcagaaggcatggaatgttctgttgaacagcacagggggagaatcatcatcagg
ggcgatgaacctgaccggattgcgcaggccgcatcacgggtatttggcattgtcggggtc
agcaggtgcatcctgacaccaccggaccgggaaataatcgaggagaccgccgcccggctt
gcagcagagaagctcacccccggcatgtcatttgcggtccgcgcaaaacgctccggtatg
gaaggattttccagccaggagctgggagcctcaacgggcgcacggatctttgaacgctgc
cccggcatccgtgtcgatctgacatcacctgactacgaggtgtttgctgaagcacggaca
ttcgggggaatcgtatatgacagccagatacccggaccagggggactgcctctcggcacc
cagggaaagtttctctccctcctctctgcaggactggactctccggttgccacctggatg
atgatgcgccgcggatgcgtccctgtcttcttccactgtgacggcggccggtatgccgga
gcagatgtccgccataccacagaaaagaaccttgcagccctctctgcctggtgcccggga
cggacagtccggatgaccgttgtcccccttgagccattctacgatgcacttgttgcgtcc
ggcatactcagaacccgctgtatcctctgcaaacgatttatgcttcgtgcggccgcagca
tttgccctccgggaagaagtggccgccatcatgacgggtgacaacatcggccaggtagca
acccagacactggtaaacctcggcgtgatacaggatgtggtgccacaatcgataccactt
ctgcgtccgcttctgacctatgataaagaagagatcgtccttcgtgcccggatgatcgga
acattccgggacaatgcaggagatctcgggtgcgccgtcgtacctaagcatccctccact
gcggcaaagcctgatgagatacgtgaggatgaatcctgcattgcactcgatgaaatcctt
aaagaagcccttgcgcatgccacagtagtgcaggcatacaatggaaaaatcatcgaggat
tcgtcgatttaa
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