Manihot esculenta (cassava): 110604172
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Entry
110604172 CDS
T05761
Name
(RefSeq) sphingosine kinase 1 isoform X1
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00600
Sphingolipid metabolism
mesc01100
Metabolic pathways
mesc04148
Efferocytosis
Module
mesc_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
110604172
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110604172
Enzymes [BR:
mesc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
110604172
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Motif
Pfam:
DAGK_cat
YegS_C
CERK_C
Motif
Other DBs
NCBI-GeneID:
110604172
NCBI-ProteinID:
XP_021597992
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Position
16:2371123..2377107
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AA seq
490 aa
AA seq
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MDQSESSPQSILSDRVTVNGTVTQLTLTADGKLRWTDRGQRCLTIEKEVLGFVIEGARIR
IKAVVDSEDSIFCAGSKGTLVRKDFVFHPLNEDQQRIWFQHLRDYLDSLGRPKRLFVFVN
PFGGKKSASKVFRDVVKPLLEDADVQITVQETKHQLHAKEVANTLDLTKYDGIVCVSGDG
ILVEVVNGFLAREDWNDAIKMPLGMVPAGTGNGMAKSLLDSVGEPCEASNAILAVIRGHK
RSLDVAAILQGETKFFSVLMLSWGLVADIDIESEKYRWMGTARLDFYAIQRIIHLRKYNG
RISFVPAPGFESYGEPSNYNGETTGKQSISISSQEQPVKIDQHGYQGPDVDLINLEWRTI
SGPFVSIWLHNVPWGGEDVMAAPDAKFSDGYLDLILIGECPKLSLLTLLSELKTGGHVKS
PYVIYLKVKAFVLEPGPRADEPMKEGIIDVDGEVLARGNGSYKCERPTLMAYDKLQITVD
PGLATLFTPV
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatccgagagctcgccacagtccatattatcggacagagtcacggtcaatggg
accgtcacgcagttgactttaaccgctgatggaaagctccggtggacggacagaggtcaa
cggtgtttgaccatcgaaaaagaggtgcttggatttgtaatcgaaggagctagaataagg
atcaaggctgttgttgatagtgaagatagcatcttctgtgcagggagtaagggaactctg
gtcaggaaggatttcgtgttccatcctctaaatgaggaccagcaaagaatttggtttcag
catctccgtgattacctcgattctctcggtcggccaaagagactgtttgtttttgtgaat
ccatttgggggaaagaaatctgcatcgaaagtttttcgtgatgttgtaaaaccgttactg
gaagacgctgatgtccaaattacagtgcaagaaacaaaacatcagctccatgccaaggag
gttgctaacacccttgatcttaccaaatatgacggtattgtttgtgttagcggagatggc
atccttgttgaggtggtgaatggatttttggccagagaggactggaatgatgcaataaaa
atgcctcttggaatggttcctgcaggtacaggaaatggaatggcaaaatctcttctggat
tcagttggggagccttgtgaagcatctaatgccattcttgcagtaatacgaggccacaag
cgctcactggatgtagctgctatcttgcaaggagagacaaaatttttcagtgtcttgatg
ctctcatggggtctggtagcagatattgacattgagtctgaaaagtaccggtggatgggt
actgctcgtcttgatttctacgctattcaacgaataatccatctaaggaaatataatggg
cgcatttcttttgtacctgcacctggctttgaatcttatggagagccaagtaattacaat
ggcgaaaccacaggcaaacagagtatttcaatttccagccaagaacaacctgttaagatt
gatcaacatggatatcagggacctgatgttgacttgatcaatctggaatggaggacaatt
agtggaccattcgtttcaatctggctgcataatgtaccttggggtggggaggatgtcatg
gcagcacctgatgccaagttctcagatggttatttggacttgatactcatcggtgagtgc
ccaaaattatccttactaacgttgctgtcagagttgaaaacagggggtcatgtcaaatca
ccatatgttatttacctcaaggtgaaagcatttgttttggagcctggtccacgggccgat
gaaccgatgaaggaagggatcattgatgtagatggtgaagtccttgccagagggaatgga
tcatacaagtgtgagcggccgactttgatggcctatgataaacttcaaataacagtggat
ccaggtttagctactctttttacccctgtataa
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