Manihot esculenta (cassava): 110614278
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Entry
110614278 CDS
T05761
Name
(RefSeq) ABC transporter B family member 19 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110614278
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mesc02000
]
110614278
04147 Exosome [BR:
mesc04147
]
110614278
04090 CD molecules [BR:
mesc04090
]
110614278
Enzymes [BR:
mesc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
110614278
Transporters [BR:
mesc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
110614278
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110614278
CD molecules [BR:
mesc04090
]
Proteins
110614278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
ABC_ATPase
AAA_22
AAA_29
AAA_21
AAA_25
Zeta_toxin
AAA_15
SbcC_Walker_B
nSTAND1
tRNA-synt_1_2
Motif
Other DBs
NCBI-GeneID:
110614278
NCBI-ProteinID:
XP_021611471
LinkDB
All DBs
Position
5:32107366..32116287
Genome browser
AA seq
1288 aa
AA seq
DB search
MEKVIPQPKGQFIVNKSDVVEDDEKKEMGNNQPLPFLKLLSYADALDWALMALGTLGSIV
HGMAQPVGYLLLGKALDAFGNNVNDDHAMVKALDKVIPYVWYMAFATFPAGILEIGCWMY
ASERQLARIRLAFLEAMLNQEIGAFDTDLTSGKIITGVTNHMSIIQDAIGEKLGHFLSSF
ATFFSGILIAAICSWEVSLLTLLVLPMILVIGATYTKKMITISAAKMVYLSEATALVEQT
ISQIKTVFAFVGESRAIKSFSECMSKQISLSKGEALIKGVGTGMFQTVTFTSWALIIWIG
AIVVSNKKSTGGDVIAAIMCILFGAISLTYAAPDMQIFNQAKAAGTEVFQVIQRKSLISH
NSTGKKLDKVEGNIDICEVHFAYPSRPENLILKGFSLSIPAGKTVALVGSSGCGKSTIIS
LVERFYDPLKGRILIDKHNIIDLDLKFLRRNLGAVSQEPSLFAGNIKDNLKVGNMNADDQ
QIQDAALMANAHSFISQLPNQYLTEVGERGVQLSGGQKQRIAIARAILKDPPILLLDEAT
SALDSESEKLVQDALERAMQGRTVILIAHRLSTIVNADMIVVVENGQVTETGTHSSLLET
SKFYSHLFSMQNISTVGDSRFIYTLIPYFFISSAHDSINRKILTYSIVLNDRSAASEEQE
STKQQVALEEIENPEKLDDCSIYLSQSPKQEEQNDRTKSAIFLRIWFGLQKKEILKTAIG
SFAAAFSGISKPIFGFFIITVGVAYYHPDAKKKVGWYSIIFALIGLLSLFTHTLQHYFFG
VVGEKAMTNLRQALYSGVLCNELAWFEKPENSVGSLTSRIIHDTSMVKMIIADRMSVIVQ
CISSILIATIVSMVVDWRMGLVAWAVMPCHFIGGLIQAKSAKGFSGDSAAAHYKLVALAS
ESAANIRTIASFCHEEHILSKAKTSLEKPIKKSRSKSIKYGLIQGVSLCLWNIAHAVALW
YTTHLVKAHQASFENGIRAYQIFSLTVPSITELWTLIPTVFSAISVLTPAFETLDRETEI
EPDSPKCSHLERIMGSVEFQNVKFNYPLRPDVTVLNNFSLQIEAGSKVALVGPSGAGKSS
VLALLLRFYDPKAGRVLIDGKNVKEYNLKMLRAQIGLVQQEPLLFSSSIRDNIAYGNEAA
SEAEIVKVSREANIDEFISNLPDGYNTVVGEKGCQLSGGQKQRIAIARTLLKKPAILLLD
EATSALDAESERSVVSALESINLNSYESSLYRTTQITVAHRLSTIKNSDIIVVMDKGQIA
EIGSHSTLTQVSEGIYSRLYQLQNLRES
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagtgattcctcaacccaaaggtcagttcattgtgaacaagagtgatgtagtg
gaggatgatgagaagaaggaaatgggaaataaccaacctctgccattcctcaagctcttg
agttacgctgatgcattggattgggcactcatggcattggggactttgggttctattgtg
catggtatggctcaacctgtcgggtacttattgctagggaaagcccttgatgcttttggg
aataatgtgaacgacgatcatgccatggttaaggctcttgataaggttattccatacgtg
tggtacatggctttcgccacctttccggccggaatactagagattggatgctggatgtac
gcaagtgaaagacaattagcacggataagattagcattcctggaagcaatgctcaatcag
gaaattggagcttttgatactgatttaacaagcggaaaaatcatcactggagtcaccaat
cacatgagtattatacaagatgcaataggagaaaagttgggccattttctgtcaagcttt
gctaccttcttctctggaatcttgattgcagccatatgctcttgggaagtgtcactgcta
accctgttagtccttcccatgattcttgtgattggtgccacctacaccaagaaaatgatc
actatttcagcagctaaaatggtttacctctctgaagcaacagccctggttgaacagacg
atatctcaaatcaagacagtttttgcatttgtcggagaaagccgtgcaatcaagtctttt
tcagagtgtatgtccaagcagatttctctcagcaaaggggaagcattgataaagggagtt
ggaacaggaatgtttcaaacggtgacatttacttcttgggcactgatcatatggattgga
gccattgtagtcagcaacaagaagtcaactggaggagatgtcatagctgcaattatgtgc
attctctttggagccatatcgctcacttatgctgctccagacatgcaaattttcaaccag
gcaaaagcagcaggtacagaagttttccaggtgattcagaggaagtcactcataagccac
aattcaacagggaagaaactggataaagttgaaggaaacattgacatatgtgaagtacac
tttgcatacccatctcgtccggaaaatttgatccttaagggcttctcattgtcaatccct
gctggtaaaacggtggcattagtgggtagcagtgggtgtggaaagagtactattatttcc
ctagttgaaagattctacgatcccttgaaagggcggattctcattgataaacacaacatc
attgatcttgatttgaaatttcttcgaaggaacttaggagcagtttcccaggaaccgtcg
ctttttgctggtaacatcaaggataacttgaaagtaggaaacatgaatgctgatgatcaa
cagatccaagatgcagctctgatggcaaatgcacactccttcatttcccagcttccaaat
cagtacttaacagaggtaggcgaaaggggagtccagttatcaggaggacaaaagcagaga
attgccatagcaagagccattctcaaagatcccccgattcttttgcttgatgaggctaca
agtgcactagattcagaatcagagaagctggttcaggatgcccttgagagggctatgcag
gggaggacggtcatcttgattgcacacaggttgtcaactattgttaatgcagatatgatt
gtagttgtagagaatggacaagttacagagacgggaacacacagcagcttgctagagacc
agcaaattctatagtcacttatttagcatgcagaatatcagcacagttggtgattcaagg
ttcatatacactttaattccctatttctttatttcttcagcacacgattcaataaacaga
aaaattttgacttattcaattgtattgaatgacagaagtgccgcatctgaagaacaggag
agtacaaagcagcaagttgcacttgaagaaattgaaaatccggaaaaacttgacgactgc
agcatctatctgagccagtctccaaagcaagaggaacagaatgacagaacaaagtcggct
atttttctcagaatatggtttggcttgcaaaagaaagaaattttgaaaactgccataggc
tcctttgcagctgctttctctggcatctcgaagcctatttttggatttttcattataaca
gtaggggtagcatactaccatccagatgcaaaaaagaaagttggatggtattccatcatc
tttgctctaataggattgctgtcattgttcactcacaccttgcagcattacttctttgga
gtggttggagagaaggccatgacaaacctcagacaagcattatattcaggagtactgtgc
aatgaactagcatggttcgagaaacctgagaacagtgttggttcccttacctcacggatc
attcatgacacctccatggtcaaaatgataattgcagaccgcatgtctgttattgtccaa
tgcatttcctcgatactaattgcaactattgttagcatggttgttgactggagaatgggt
ttggtagcttgggcagtcatgccttgccatttcataggtggactgattcaagccaagtct
gccaaaggattttcaggtgattctgctgcagcacattacaagcttgtggcacttgcttct
gagtctgcagccaatataagaaccattgcatctttttgccatgaagagcacatccttagc
aaagccaaaacatccctagaaaaaccaataaagaagagcaggagcaagagcatcaagtat
ggactcattcaaggtgtctccctttgtttatggaatattgcacatgctgttgctctgtgg
tacactacacatttagtcaaagcacatcaagcaagcttcgaaaatggcataagagcatac
cagattttctctctcacagtaccttcaatcacagaattatggacactgatccctactgtc
ttttctgccattagtgtgttaactccagcatttgaaacccttgacagggaaactgaaatt
gaaccagattcacccaaatgttcacatcttgagaggataatgggcagtgtagaatttcag
aatgtcaaatttaactacccactaaggccagatgtaactgttctcaacaacttcagtttg
caaattgaagctggatcaaaggtggcccttgttggaccaagtggagctggaaagtcctca
gttttggctcttttgcttagattctacgatcccaaagcaggaagggtgctaattgatggg
aagaacgtcaaagaatataatctgaaaatgttgagggcacaaatagggttggtgcaacag
gagccgcttctttttagttcttcaattagagacaacattgcatacgggaatgaggcggct
tctgaagcagaaattgttaaggtatcaagggaagcaaacattgatgagtttataagtaat
ttgcctgatggatacaacacagttgttggagagaaaggctgccaactttcaggtggacaa
aagcaacgcatagccattgctaggactctactaaagaaaccagcaatcttgctcctggat
gaagcaacaagtgcccttgatgctgagtctgaaagatctgtagtgagtgccctagaatca
ataaatctgaacagctacgagagctccctgtacagaacaacacagattacagttgctcac
aggctttccaccataaaaaactcggatattatagttgttatggacaaaggtcagattgcc
gagataggttctcattcgaccctgacacaagtgtctgaaggcatatattcaaggttatac
cagcttcagaacttgcgagaaagttag
DBGET
integrated database retrieval system
