Manihot esculenta (cassava): 110617698
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Entry
110617698 CDS
T05761
Name
(RefSeq) cyclin-dependent kinase D-3
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03022
Basal transcription factors
mesc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110617698
09124 Replication and repair
03420 Nucleotide excision repair
110617698
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mesc01001
]
110617698
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110617698
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110617698
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110617698
Enzymes [BR:
mesc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
110617698
2.7.11.23 [RNA-polymerase]-subunit kinase
110617698
Protein kinases [BR:
mesc01001
]
Serine/threonine kinases: CMGC group
CDK family
110617698
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110617698
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
110617698
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110617698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
110617698
NCBI-ProteinID:
XP_021616348
LinkDB
All DBs
Position
6:1476436..1486713
Genome browser
AA seq
417 aa
AA seq
DB search
MSENDTEKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR
EIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYFQMT
LKGLAYCHKKWVLHRDMKPNNLLIASNGQLKLADFGLARIFGSPDRKFTHQVFARWYRAP
ELLFGTKQYGSGVDVWAAACIFAELLLRRPFLQGTSDIDQLGKIFQAFGTPTPSQWPDLV
YLPDYVEYQSVPAQPWRKLFPMATDDALDLLAKMFTYDPKVRISVEQALEHRYFSSAPLP
TEPAKLPRPAPKRESVNPRASDFHPLEGPTVLSPPRKARRVMPDREGFDGNAYQVDKIDE
HGEIRQAAGNYTGRNEQVPMSIDFSVFGSRPMSRPTINSADRSHLKRKLDLEFQHPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaacgacacagaaaagaaagttgctgataggtatctcaagcgtgaggtgctt
ggtgaaggtacttatggtgtcgtctacaaagccatcgatactaagactggacagacagtg
gctattaagaaaattcggcttgggaagcaaaaggagggggttaattttacagcacttcga
gagattaaactgcttaaagagcttaaagacccaaatataatcgagttgattgatgcattc
cctcacaaaggaaatttgcatcttgtcttcgagttcatggagactgatcttgaagcagtt
attcgtgaccgaaacatatttctttcaccagctgacataaaatcatactttcagatgaca
ttgaagggactggcttactgccacaagaaatgggttctccatagagatatgaagccaaac
aacttgttgatagcttctaatggacagcttaaacttgcagattttggtttggcacgaatt
tttgggagcccagatcgcaagttcactcaccaagtctttgctcgatggtatagagcgcct
gagctgttgtttggcaccaaacaatatggttctggggttgatgtttgggctgcagcctgt
atatttgctgaactcctccttcgccgaccatttctacagggaacaagtgatattgatcaa
ttagggaagatttttcaagcctttgggactccaacaccttctcagtggcctgatttggtc
taccttcctgattatgtggaataccaatctgttcctgcacaaccttggcgtaaattgttt
ccgatggctactgatgatgctttagatctgttggcaaagatgtttacttatgatccaaaa
gttagaatatcggttgaacaggcattagagcaccggtacttctcatctgcacctctgcct
acggagccggctaagctccctagacctgcccccaagcgggaatctgtcaatcctagagct
tcagatttccatccactggagggacccactgtgctatcacctccaaggaaggcaagaaga
gtgatgcctgaccgtgagggattcgatggaaatgcatatcaagttgataagattgatgag
catggtgaaatcagacaggcagctgggaattacactggcaggaatgaacaggtgccaatg
tcaatagatttttctgtttttggatcaagacctatgagcagaccgacaattaacagtgct
gacagatcccatctgaagaggaaactagatcttgaattccagcatccagaatag
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