Manihot esculenta (cassava): 110618001
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Entry
110618001 CDS
T05761
Name
(RefSeq) ABC transporter D family member 1 isoform X1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc02010
ABC transporters
mesc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110618001
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110618001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mesc02000
]
110618001
Enzymes [BR:
mesc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
110618001
Transporters [BR:
mesc02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
110618001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_23
AAA_16
nSTAND1
SMC_N
ABC_membrane
Motif
Other DBs
NCBI-GeneID:
110618001
NCBI-ProteinID:
XP_021616683
LinkDB
All DBs
Position
6:complement(6329600..6360495)
Genome browser
AA seq
1345 aa
AA seq
DB search
MPSLQLLQLTEHGRSLLASRRKSLLLAAGILVVGGTTAYVKSRNSSKKFDSFGHYNGLRE
DNDDSDERVTKEVKKTIKKKGSLKSLHVLASVLLSEMGKRGTSDLFAMIAIAVMRTALSN
RLAKVQGFLFRAAFLRRVPLFFRLISENILLCFLLSTIHSTSKYVTGTLSLCFRRILTKR
IHSHYFENMAYYKISHVDGRITNPEQRIASDVPRFCSELSELVQEDLTAVTDGLLYTWRL
CSYASPKYIFWILAYVLGAGTMIRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAF
YGGERREESHIQQKFKDLVRHMRIVLHDHWWFGMIQDFLVKYLGATVAVVLIIEPFFAGN
LRPDASTLGRATMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELIVISRE
LNCEDKTSLQRSGSRNYFSEADYVEFSKVKVVTPTRNVLVEDLTLKVESGSNLLITGPNG
SGKSSLFRVLGGLWPLVSGHIVKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTVDQ
EVEPLTQSGMLELLKNVDLEYLLDRYPPEQEVNWGEELSLGEQQRLGMARLFYHKPKFAI
LDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWQVSYKRRD
SAALTEPGTNDTSACETERKSDAMLVQRAFSTSNKDSAFSNSKAQSYISEVIVAFHGADP
GLQLPIVPQLQRAPRALALRVAAMSKILVPTVLDKQGAHLLAVAFLVVSRTWVSDRIASL
NGTTVKFVLEQDKTSFIRLIGVSILQSAASSIIAPSLRHLTARLALGWRIRLTQHLLRSY
LRNNAFYKVFHLSSKNIDADQRITDDLEKLTRDLSGLVTGMVKPSVDILWFTWRMKLLTG
RRGVAILYAYMLLGLGFLRTVTPDFGDLASREQQLEGTFRFMHERLRTHAESVAFFGGGA
REKAMIESRFRELLDHSLLLLKKKWLYGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRAQ
ISTQGELAHALRFLASVVSQSFLAFGDILELHKKFLELSGSINRIFELEELLDAAQSGDW
LTEKLSPFKESDSDGQDAISFVDVDIITPAQKLLARQLRCDVVQGKSLLVTGPNGSGKSS
VFRVLRGLWPIVSGRLSKPAHSNEDSEYGCGIFYVPQRPYTCLGTLRDQIIYPLSRDEAV
RMTLKLHGRGKISGDTTKLLDTRLKAILENVRLNYLLEREEGGWDANLNWEDILSLGEQQ
RLGMARLFFHKPKFGILDECTNATSVDVEEQLYRLATDMNITFVTSSQRPALIPFHSVEL
RLIDGEGNWELRTIKQSLDSDHLLS
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgccttctctgcaattgttgcaactaactgagcatggtcgaagcctcttggcttcaaga
aggaaatctctactgcttgctgccggtatcttggtggttggtgggactactgcatatgtg
aagtcacggaacagctctaaaaagtttgattcttttggtcattacaatgggcttagagaa
gataatgacgattcggacgagcgggttacgaaagaagttaagaaaactattaaaaagaaa
ggaagtttgaaatcactccatgttctagcttctgttcttttgtctgagatgggcaaaagg
ggaacaagcgacctttttgctatgatagccatagcagtgatgagaactgctttgagcaat
agattagcaaaagtacaggggtttctattccgtgctgccttccttcgacgcgtgccatta
tttttcaggctgatatctgaaaatatcctattatgttttctcctatccactattcattct
acttcaaagtatgtaactgggacattaagtctgtgtttcagaagaatattgactaaacgt
atccattcacattattttgagaacatggcttactataagatatcacatgttgatggtcgg
attactaatcctgaacaacgaattgcaagtgatgtgccaagattttgttcagagttgagt
gaactggtacaggaagacctgacagcagttactgatggccttctctatacttggcgcctg
tgctcttatgctagcccaaaatatattttttggatattggcctatgtgttgggagcaggg
accatgattagaaacttttctcctgcttttgggaaactgatgtcaaaagaacaacagttg
gaaggtgaatatcggcagcttcattcacgtttaaggacccatgctgaaagtatagcattc
tatggtggagaacgtagagaggaatcacatattcagcagaaatttaaggatcttgtaaga
cacatgagaattgttcttcatgaccattggtggtttggcatgattcaagattttttggtg
aagtatcttggtgctacagtcgcagttgtattgattatagagcccttttttgctggcaat
cttagacctgatgcctctactttgggaagggcaacaatgttaagcaacttaagatatcac
accagtgttattatatcactatttcagtccttgggaactctttctataagttcaagacga
ctcaatcgtctcagtggttatgctgatcgcattcatgagttaatagtaatatcaagagag
ctaaactgtgaagataaaacatctctacaaagaagtggaagtaggaactacttcagtgaa
gctgattatgtggagttttctaaggtcaaggttgttaccccaactcgtaatgttttggtg
gaagatctgactcttaaagttgaatcaggatctaatctgttaattacaggtccaaatggt
agtggtaagagttcactcttccgagttctaggtggcctctggcctttggtgtctggccat
attgtgaaacctggtgttggttctgatcttaataaggagattttctatgtgccacaaagg
ccatatacagctgtaggcacacttcgtgatcagttaatttatcctctcactgtggaccag
gaggttgaaccactaacacagagtggaatgttggagctcttgaaaaatgttgatcttgag
tatctgttagaccgttatccacctgagcaggaggtaaattggggtgaggaattgtctttg
ggagagcaacaaaggttaggcatggccagactattctaccacaagcctaaatttgcaatt
ctagatgagtgcaccagtgcagtgactactgacatggaggaacgattttgtgctaaagtt
agagctatgggaacttcatgtataaccatatcacaccgtccagctctagttgcgtttcat
gatgttgttctgtccttggatggagaagggggctggcaagttagttacaaaaggagggat
tctgctgccctgactgaacctgggaccaatgacacaagcgcttgtgagactgaacgcaag
agtgatgcaatgttagttcaacgtgcattttccacctctaataaggattctgcattctca
aattcaaaggcgcaatcatatatttcagaggttatagtggcatttcacggtgcagatcct
ggtcttcaattgccaattgtcccacaactccaaagggctccaagggcattggcattgaga
gtagcagccatgtctaaaatactggtaccaactgtgcttgataaacaaggggcacactta
cttgcagttgcttttcttgttgtctcaagaacatgggtctcagatcggattgcctcgttg
aatggcaccactgtaaagtttgttttggagcaggataagacatcctttattcgattaatt
ggtgttagtattcttcaaagtgctgcatcctctatcattgcaccttcactaaggcacttg
accgccaggttggctcttggatggagaatccgattgacgcagcatctactgaggagctat
ttgagaaacaatgcgttctacaaggtcttccatttgtcgagcaaaaatattgatgcagat
caaaggataactgatgatcttgaaaagctgaccagagacttgtctggattagtaaccgga
atggtgaagccatcagtagacatcttgtggttcacctggagaatgaagctgttaacaggt
cggaggggggttgccatattgtatgcttatatgctgcttggtctgggttttctgagaact
gtaacccccgacttcggtgatcttgcaagtcgagagcaacaacttgaaggcacttttagg
ttcatgcatgaaagactgcgtacacatgccgagtctgttgctttctttggaggcggtgca
agagagaaagcaatgattgagtcaagattcagggaattgcttgaccattctttgttactt
ctaaagaagaaatggttatacggtatcctagatgattttgtcacaaaacaactcccacat
aatgtgacttggggtttgagcttgttgtatgccatggaacacaagggcgaccgggctcag
atttcaactcaaggtgagctggcacatgcattgcggttcttagcctctgtagtatctcag
agctttttagcatttggagacattcttgaactgcataaaaagttccttgagctctctggc
agtataaatagaatttttgagttggaagagcttctggatgctgctcagtctggggattgg
ttgactgaaaaactatctccatttaaggagagtgatagtgatgggcaagatgccatttcc
tttgtggatgttgatatcattacacctgcacagaaattgttggccaggcagttgagatgt
gacgtagtacaaggaaaaagcttgcttgttacaggtccaaatggaagtgggaaaagttct
gttttcagagtccttcgtggtctttggcccattgtgagtggcagactttccaaaccagca
cattctaatgaagatagtgaatatggttgtggcatcttctatgttcctcaacgaccatac
acatgcttaggaaccttgagagatcaaattatatatcctctctctcgtgatgaagcagtg
cgcatgacattaaagctgcatggtagaggtaaaatatctggtgacaccacaaagcttctg
gatacacgtttgaaagcaattctggagaatgttcgactgaactatcttctggaaagggag
gaaggtggttgggatgctaatttgaattgggaagacattctctctcttggagaacaacag
agattaggcatggcacgcctattcttccacaagcctaaatttggcattctcgacgagtgt
accaatgccacgagcgttgatgttgaagaacaactttataggcttgctactgatatgaac
atcacatttgttacatcctcacagcgtcctgctctaataccattccattctgtggaatta
cggcttattgatggtgagggtaattgggagcttcgtacaataaagcaatcacttgacagt
gatcatttattgagttaa
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