KEGG   Manihot esculenta (cassava): 110618015
Entry
110618015         CDS       T05761                                 
Name
(RefSeq) lysine-specific demethylase JMJ30 isoform X1
  KO
K24444  [histone H3]-dimethyl/trimethyl-L-lysine36 demethylase [EC:1.14.11.27 1.14.11.-]
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mesc03036]
    110618015
Enzymes [BR:mesc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     110618015
Chromosome and associated proteins [BR:mesc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    110618015
SSDB
Motif
Pfam: Cupin_8 JmjC_2 JmjC FixP_N Cupin_2
Other DBs
NCBI-GeneID: 110618015
NCBI-ProteinID: XP_021616705
LinkDB
Position
6:complement(29362458..29366623)
AA seq 409 aa
MYAAAVADQLSTPILDAESSNLLQSISSHGGYAYVSMATLAASGDFRAAEAAREMAWEQL
HSGPWHSVLPVWRDAYSMACLHVAKFHYRNGELKDALRVLDMGLIMGGMLLRKDLDSAVE
IISAKTRENDDRCESFEKSEHNLAPEAEFDKVEVLQFLPAKSLSCKTVVNKSAPSMEAFL
REHFLCGSPVIISDCMTHWPARKKWNDMDYLKRVAGDRTVPVEVGKNYLCQEWKQELITF
SQFLERIQSNGTSSDGPTYLAQHPLFDQINELRDDICIPDYCFVGGGELRSVNAWFGPAG
TVTPLHHDPHHNILAQVVGKKYIRLYPASLCEELYPHGETMLFNSSQVDLDNIDEKEFPK
VHDLEFLDCILEEGEMLYIPPKWWHYVRSLTISFSVTYWWSDTGSSAVS
NT seq 1230 nt   +upstreamnt  +downstreamnt
atgtacgctgctgccgtcgcggatcagctttccactcctatcctagacgccgaatcctcc
aatctcctccagtccatttcttcccacggaggctacgcttacgtcagcatggccacactt
gctgcctccggcgacttccgagcggcggaggctgcccgtgagatggcttgggagcagctc
cattctggtccctggcattctgttctcccagtctggagagacgcttactcaatggcgtgt
ctccacgtggccaagttccattatcgaaacggtgagctcaaagacgcgcttagggttttg
gatatgggtctgatcatgggaggcatgttgctgaggaaggatttggactccgctgttgaa
attatatcagcgaaaacgagagaaaatgacgaccgatgtgagagttttgagaaatcggag
cataacttggctccagaagctgagtttgataaggtggaggtgcttcaatttttacctgcg
aagtccttgtcttgcaagactgtagtgaacaaatctgccccatctatggaagcatttcta
cgtgagcatttcttatgtggttctccagttataattagtgattgtatgactcattggcct
gccaggaaaaagtggaatgacatggattacctcaaaagggttgctggtgaccgcaccgtt
ccagtcgaggttgggaaaaattacctatgccaagagtggaaacaagagcttataacattt
tcccagttcctcgagaggattcagtccaatggtacttcttctgatggccccacctatctt
gcgcaacatccattatttgatcagataaatgagctaagggatgacatttgcattcctgac
tactgttttgttggtggtggggagctcaggtctgttaatgcttggtttggtccagctgga
acagttacaccattacaccatgatccacaccataatatacttgctcaggttgttgggaaa
aagtatattaggctttaccctgcttcattgtgtgaagaactgtatccacatggtgaaacc
atgcttttcaattccagccaggttgatctggacaacatagatgagaaagaatttccaaaa
gtacacgacttggaattcctggactgcattttagaagaaggtgaaatgctttacatccca
ccaaaatggtggcactatgtccgatcactaacaattagtttttcagttacatactggtgg
agcgacactggcagttcagctgtgtcttga

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