Manihot esculenta (cassava): 110618206
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Entry
110618206 CDS
T05761
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110618206
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mesc01009
]
110618206
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110618206
03036 Chromosome and associated proteins [BR:
mesc03036
]
110618206
Protein phosphatases and associated proteins [BR:
mesc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
110618206
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
110618206
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
110618206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EZ
PDS5
Cnd1
Adaptin_N
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
110618206
NCBI-ProteinID:
XP_021617004
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Position
6:20646261..20661771
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AA seq
587 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNDDIQLRLNSIRKLSTIAGALGQERTRKELIPFLSENNDDD
DEVLLTMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLRRIGSQMRET
DLVDWYIPLVKRLAAGEWFTARVSACGLFHIAYSSAPDILKTELLSLYSQLCQDDMPMVR
RSAASNLGKFAATIEPAHLKTDILSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
YILPVIVNFSQDKSWRVRYMVANQLYEICEAVGPEPTRTDLLPAYVRLLRDNEAEVRIAA
AGKVTKLGSILNPELVIQHILPCVKELSSDSSQHVRSALASVIMGLAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNLVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDEKLGALCMQWLQDKVYSIREAAAINLKRVAEEFGPEWAMQHIIPQV
LEMINNPHYLYRMTILRAISLLAPVMGSEITCSKLLPPVINASKDRVPNIKFNTAKVLQS
LVPVVDQSVVENSIRPSLVELSEDPDVDVRFFANQALQAIDNIMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggtcgatgagccactatatcccatagctgttctcatagatgagctaaaaaat
gatgatatccagcttcgtctgaactcaatccgtaagctatctacgattgctggtgctctt
gggcaggagcggacccgtaaggaattaattccatttttgagtgaaaacaatgatgatgat
gatgaggttcttcttacaatggcagaggagttgggagtgttcatcccctatgttggggga
gtagagcatgcccacgttttgcttcctcctttggaaaccctttgcactgtggaggaaaca
tgtgtgagagataaggctgtggagtctttgcgtaggattggatcccagatgagggagact
gacttggttgactggtacattcctcttgttaagaggctggctgctggagaatggttcaca
gctcgggtttctgcatgtggactatttcatattgcctattcaagtgcccctgatatatta
aagacagaattgctttcattatatagccagctctgtcaagatgacatgcccatggttaga
aggtctgctgcctcaaatctggggaaatttgctgcaactattgaacccgctcatctgaag
actgatatcttgtcaatatttgaggatcttacccaggatgatcaggattctgttcgttta
ttggctgttgagggttgtgctgctcttggaaaattgttggagccccaggattgtgttgcc
tatattcttcctgttattgtcaacttctctcaggacaagtcttggcgtgtacgctacatg
gtcgcaaatcaattatatgaaatttgtgaagctgtggggcctgaacctactaggacggac
ttgcttcctgcatatgtacgcttacttcgtgataatgaggctgaagtacgcatagcagct
gctggcaaagtaaccaagcttggctccattttgaatccagaactggttattcaacatatt
ctcccatgtgtaaaggaactttcatcagattcttcccagcatgttcggtctgctttggct
tcagttataatgggactggcccctgtcctggggaaggatgctactattgagcagcttctt
ccaattttcctgtcccttttgaaggatgaatttcctgatgtgcgcctcaacataatcagc
aagcttgatcaagtgaatctggttattggaattgatctgctgtcccaatcattattgcca
gccattgttgagcttgcagaggatagacattggagggttcggcttgcaatcatagagtat
atacctttattggctagtcagttgggtgttggtttctttgatgagaaacttggggctctt
tgcatgcagtggttacaggataaggtttactcaattcgtgaagctgctgctattaattta
aagcgggtcgcagaagaatttggtccagagtgggcaatgcagcacataattccacaggtg
ttggagatgattaacaatcctcactatttgtaccgtatgactattttacgtgctatctca
ctccttgctcctgttatgggatcagaaattacatgttctaaactgctgcctccggtcatt
aatgcatcaaaagacagggtgcccaacattaagttcaatacggcaaaggtgctgcagtcc
ctcgtccctgtagttgatcagtctgtagttgagaattccatccggcccagtttggttgag
ctgagcgaggatccagatgttgacgtccggttttttgccaaccaagcacttcaggcaatc
gataatatcatgatgtctagctag
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