Manihot esculenta (cassava): 110623049
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Entry
110623049 CDS
T05761
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00906
Carotenoid biosynthesis
mesc01100
Metabolic pathways
mesc01110
Biosynthesis of secondary metabolites
Module
mesc_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
110623049
Enzymes [BR:
mesc01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
110623049
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
FAD_oxidored
HI0933_like
Pyr_redox
Thi4
NAD_binding_8
Pyr_redox_3
NAD_binding_9
FAD_binding_2
GIDA
FAD_binding_3
Trp_halogenase
3HCDH_N
XdhC_C
Motif
Other DBs
NCBI-GeneID:
110623049
NCBI-ProteinID:
XP_021623586
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Position
9:complement(1867169..1870383)
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AA seq
504 aa
AA seq
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MDTLLKTHNKLEFLPQLHVFPEKASHLGSIKLQNPELSFCLKRPYNKRVRNGCVKATSGA
LLELVPETKKENLEFDLPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSKAGLSVCLIDPSP
KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDKTKKDLGRPYGRVNRKQLKSKML
QKCISNGVKFHQAKVVKVIHEESKSLLICNDGITIQAAVVLDATGFSRCLVQYDKPYNPG
YQVAYGILAEVEEHPFDIDKMVFMDWRDSHLDNNLEVKQRNSKIPTFLYAMPFSSDRIFL
EETSLVARPGVPMEDIQERMVARLRHLGIKVKSIEEDERCVIPMGGPLPVLPQRVVGIGG
TAGMVHPSTGYMVARTLAAAPIVANSIVQYLGSGRSLSGNELAAEVWKDLWPIQRRRQRE
FFCFGMDILLKLDLQATRRFFDAFFDLEPHYWHGFLSSRLFLPELIFFGLSLFSHASNTS
RIEIMTKGTLPLVNMINNLVQDRE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggatactttattgaaaacacataataagcttgagttcttgcctcaacttcatgtgttc
ccagagaaagcgagtcatttgggctctataaagcttcaaaacccagagcttagtttttgt
ctgaagaggccttacaataaaagggtaaggaatggttgtgttaaggctaccagtggtgct
cttttggagcttgtaccagagaccaagaaggaaaatcttgagtttgaccttcccatgtat
gacccatcaaaaggccttgtggttgaccttgcagttgtgggtggcggccctgcagggctt
gcagttgcacaacaagtctcaaaggcagggctttctgtttgtttgattgatccatctcct
aaattgatttggcctaataattatggtgtttgggtggatgaatttgaggccatggatttg
cttgattgtcttgataccacctggtctggtgctgttgtctacattgatgacaaaacgaag
aaagatcttggtagaccatatgggagggttaataggaagcagctaaagtcaaaaatgcta
caaaaatgcatatccaatggtgttaagtttcaccaagctaaagtggtcaaggttattcat
gaggaatctaaatccttattaatttgcaacgatggcataacaatccaagctgctgtggtg
ctagatgcaactggcttttctagatgccttgttcagtatgataagccatataatccaggt
tatcaagtggcttatggaattttagcagaggtagaagagcacccatttgatatagataag
atggtttttatggattggagagattcacatttggataataatttggaggtaaaacagaga
aatagtaagatccctacttttctatatgcaatgcccttttcttcagatagaatatttctt
gaagaaacttctctagttgctcggcctggagtacccatggaagatatccaggaaaggatg
gtggctagattaaggcacctaggcataaaagtgaaaagtattgaagaagacgagcgttgt
gtcatcccaatgggtggtcccctccccgtcctgcctcagagggttgttggaattggtggt
accgcaggcatggttcacccttcaactgggtacatggtagcaagaactctagctgcagct
ccaatagttgccaattccatagtccagtaccttggttctggtagaagcctttcaggaaat
gaactggcagcagaagtttggaaagatttatggcctatacagagaaggagacaaagggag
ttcttctgtttcggaatggatattctgttgaaactcgatttacaagccacaagaaggttt
tttgatgcattctttgacctggaacctcactattggcatggttttttgtcttctcgactg
tttctccctgagcttatattttttggtctttcattgttttcccatgcttctaatacttcc
aggatagagattatgacaaagggtactcttcctttggttaacatgatcaacaatttagta
caggatagagaatag
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