Manihot esculenta (cassava): 110623806
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Entry
110623806 CDS
T05761
Name
(RefSeq) protein EXPORTIN 1A isoform X1
KO
K14290
exportin-1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03008
Ribosome biogenesis in eukaryotes
mesc03013
Nucleocytoplasmic transport
mesc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110623806
03008 Ribosome biogenesis in eukaryotes
110623806
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110623806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110623806
03009 Ribosome biogenesis [BR:
mesc03009
]
110623806
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110623806
03036 Chromosome and associated proteins [BR:
mesc03036
]
110623806
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110623806
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
110623806
Pre-60S particles
110623806
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
110623806
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110623806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Adaptin_N
DUF3385
Motif
Other DBs
NCBI-GeneID:
110623806
NCBI-ProteinID:
XP_021624527
LinkDB
All DBs
Position
9:complement(32665877..32682553)
Genome browser
AA seq
1081 aa
AA seq
DB search
MASLAMAAEKLRDLSQPIDVPLLDATVAAFYGTGSKEERAAADRILQNLQSNPDMWLQVV
HILQNTKNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFRLER
LYVNKLNVILVQILKHEWPARWRSFVPDLVAAAKTSETICENCMFILKLLSEEVFDFSRG
EMTQQKIKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLSTLHAFLSWIPLGYIFES
PLLETLLKFFPVPSYRNLTLQCLTEVAALNFGDFYNVQYVKMYNFFMVQLQTILPPTTNI
PEAYSHGSSEEQAFIQNLALFFSSFYKFHIRVLEASPENISALLAGLEYLINISYVDDTE
VFKVCLDYWNSLVLELFEAHHNLDNPAVTANVMGLQMPSLHGMIDGIGSQILQRRQLYAN
PMSKLRMLMVCRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHED
TEKQMLKKLSKQLSGEDWSWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEIT
KGKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKI
VQKCKRKFVIVQVGESEPFVSELLSGLPATVTDLEPHQIHTFYESVGHMIQAEPDPQKRD
EYLQRLMDLPNQKWAEIIGQARQSVDFLKDQEVIRAVLNILQTNTSVASSLGTYFLSQIS
LIFLDMLNVYRMYSELISSSIAEGGPYASKTSYVKLLRSVKRETLKLIEAFLDKAEDQPQ
IGKQFVPPMMDPVLGDYARNLPDARESEVLSLFATIINKYKSAMIDDVPRIFEAVFQCTL
EMITKNFEDYPEHRLKFFSLLRAIATHCFPALILLSSQQLKLVMDSIIWACRHTERNIAE
TGLNLQLEMLKNFQASEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCL
VESGALTEPLWDAATVPYPYPNNAIFVREFTIKLLGTSFPNMTASEVTQFVNGLFESRTD
LSVFKNHIRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPNEIQDEMLD
S
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctttggctatggctgctgagaaacttagagatttaagccagccgattgatgtt
cctttactcgatgccactgttgctgcgttttatggcaccggatctaaggaagagagggct
gctgcagacaggatattgcagaatttacaaagcaatccagatatgtggctccaagttgtc
cacattttacaaaatacaaagaacctgaacaccaaattctttgctttgcaggtccttgaa
ggtgttataaagtatagatggaatgccttgcctgttgagcaacgggatggaatgaagaat
tatatttctgaagtcattgtacagctatccagcaatgaggcttcttttcgattggaaagg
ctatatgtcaacaagctcaatgtaattttggttcagatattgaaacatgagtggccagct
agatggagaagctttgttcctgatcttgttgctgctgcaaaaactagtgaaacgatttgt
gagaattgcatgtttatattgaaacttctaagtgaagaagtttttgatttctctcgtggg
gaaatgactcaacagaagatcaaagagcttaaacaatcacttaacagtgaatttcaactc
atccatgagttatgcttatatgtactatcagcctctcaaagaactgagcttattcgggca
acattgtctaccttgcatgcatttctttcctggattccattaggctatatttttgaatct
cctctgctggaaacactcctgaagtttttccctgtgccatcatatcgaaatcttaccctc
cagtgtttgacagaggttgcagctctgaattttggagacttctacaatgtgcagtatgtt
aagatgtataatttcttcatggtccaattacagaccattcttcctccaacaacaaacatt
ccagaagcttattctcacggttctagcgaggaacaggcatttattcagaatttggcattg
tttttctcttcattttacaagtttcacattcgagtgctggaggcttcaccagagaacata
tctgcattgttggcaggtcttgaatatcttattaatatctcatatgttgatgacacagag
gtttttaaggtttgcttggactattggaactcattggttttggagctctttgaggcgcat
cataatttggataatcctgctgtaactgcaaacgtaatgggattgcagatgccttcgctt
catggtatgattgatggcatagggtcacaaattttgcagcggaggcagctttatgctaat
cctatgtcaaagttgagaatgctcatggtttgccgtatggctaaacctgaagaggttctc
atagttgaggatgagaatggcaacattgttcgggagactatgaaggacaatgatgttctt
gttcaatacaagatcatgagagaaaccttgatctacttgtctcatcttgatcacgaggac
actgaaaagcagatgctgaagaaattaagtaaacaattgagtggtgaggattggagttgg
aacaatctaaacactctatgttgggctataggatctatttctggttctatgatggaagaa
caggaaaaccgattccttgtgatggtcattcgtgatttattaaatttgtgtgaaatcaca
aagggaaaagataacaaagctgtaattgctagtaacatcatgtatgttgttgggcagtat
ccgcgatttcttagagcccattggaagtttttaaaaactgttgtcaataagttgtttgag
ttcatgcatgaaacacatcctggagttcaggatatggcctgcgacacgttcttgaaaatt
gtccagaaatgcaaacggaaatttgtcatcgtccaggttggagaaagtgaaccatttgtg
tctgaacttctgtcaggcctaccagcaactgttactgatcttgagcctcatcagatccat
acattttatgaatctgtagggcatatgattcaagctgaacctgatccacagaagagagat
gaatacctgcagagattgatggatcttccgaaccaaaaatgggctgaaatcattgggcag
gcacgccagagtgttgattttctgaaagatcaagaagtgatcagggcagttctcaacata
ttgcaaacaaatacaagtgttgctagttctcttggaacatatttcttgtcccaaatctct
ttgatctttctggacatgcttaatgtgtatagaatgtacagtgagcttatatcaagtagc
attgctgaaggagggccttatgcatctaaaacatcctatgtgaagcttttacgatcggtt
aagagagagacacttaaactcattgaggcctttttggacaaggctgaagaccagccgcag
attggcaagcaatttgtgcccccaatgatggatcctgttctcggtgactatgcaaggaat
ttgcctgatgcaagagaatcagaagttctttcactttttgcaacaattataaacaagtac
aaatctgcaatgatagatgatgtgccccggatatttgaagcagttttccagtgcacactt
gagatgataactaaaaactttgaagattaccctgagcatcgcctcaagttcttttcatta
ctgcgggccattgcaacacattgttttcctgctttgattctgttgtcgagtcagcaactg
aagcttgtaatggattcaatcatatgggcatgtcggcatacagaaaggaatattgctgaa
actggtcttaaccttcaattggagatgctgaagaactttcaggcttctgaattctgtaac
cagttctatcgtacgtactttctcacaattgagcaggaaatatttgcagtcttgacagat
acatttcacaaacctggcttcaagttgcatgtcttagtgttacagcacttgttttgtctg
gttgaaagtggcgctctgaccgagccattatgggatgctgcaacagtaccttatccatac
cctaacaatgcaatttttgttcgtgaattcaccattaaacttttggggacatcttttccc
aacatgactgcttcggaggtcactcaatttgttaatgggctatttgagtcaagaactgac
ctctctgtatttaagaatcacatcagagactttcttgtccaatcaaaagaattttcagct
caggacaacaaagatctttatgcagaagaagctgctgctcagagagaaagagagagacag
agaatgctttctattccagggcttattgctcctaatgaaatccaagatgagatgttggac
tcatag
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