Manihot esculenta (cassava): 110627270
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Entry
110627270 CDS
T05761
Name
(RefSeq) ABC transporter D family member 1 isoform X1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc02010
ABC transporters
mesc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110627270
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110627270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mesc02000
]
110627270
Enzymes [BR:
mesc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
110627270
Transporters [BR:
mesc02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
110627270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_23
SMC_N
AAA_16
nSTAND1
Mg_chelatase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
110627270
NCBI-ProteinID:
XP_021629209
LinkDB
All DBs
Position
12:complement(34235546..34263483)
Genome browser
AA seq
1336 aa
AA seq
DB search
MPSLQLLQLTKQGQSLLASRRKSLLLATGILVVGGTAAYVQSRHSSKKPDSFGYSNGLKD
NNDKLDKQVTDEYYLKKTIQNKGSLKPLHVLAAVLLSDMGKMGARDLFTMVAIAVLRTAL
SNRLAKVQGFLFRAAFLRRVPLFFRLISENILLCFLLSVIHSTSKYVTGTLSLCFRKILT
KHIHANYFENMAYYRMSHVDCRITNPEQRIASDVPRFCSELSELVQDDLTAVTDSLLYTW
RLCSYAGPKYFFWILAYVVGAGTMIRNFSPAFGKLMSKEQQLEGEYRQLHSRLRAHAESI
AFYGGECREESHIQQKFKDLVKHMRVALHDHWWFGMIQDFLLKYLGATVAVILTMEPFFA
GPLRPDTSTLGRATMLSNLRYHTSVITSLFQSLGTLSRSARQLNRLSGYAGRIYELIVVS
RELNSDDRAYLQKIGSGNYFSEADHVEFSGVKVVTPTGNVLVEDLTLKVESGSNLLITGP
NGSGKSSLFRVLGGLWPLLSGHIVKPGVGSDLNKEIFYVPQRPYTVIGTLRDQLIYPLTV
DQEVEPLTPTGMMELLKNVDLEYLLDRYPAEQEVNWGEELSLGEQQRLGMARLFYHRPKF
AILDECTSAVTTDMEERFCTKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWQVSYKR
KDSSSLMTNVKKTTATERRSDAVVVQRAFATSDKDSAFSKSKAQSYISEVIVASPRADAG
LPLPIFPQLQRAPRVLALRVAAMFRILASTVLDKQGAHLLALAFLVLSRTWVTDRIASLN
GTTLKYVLEQDKTSFIQLIGVSILQSAASSFIAPSLRHLKARLALGWRICLTQHLLKKYL
RNNAFYKVFHMLGKNIDADQRITHDLEKLSRDFSGLLTGMIKPSVDILWFTWRMKLLMGQ
KGVAILYAYMLLGLGFLRTTTPDFGDLTSQAQQLEGTFRFIHERLRMHAESIAFFGGGTR
EKAMIDSRFRELLDHSLLLLKKKWLYGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALT
SNQAELAHALRFLASVVSQSFLAFGDILELHKKFLELSGGVNRLFELEEILDAAQFGDWP
TDKLSPSKENDVDAKDFISFTEVDIISPAQKLLAKQLTFDIVQGKSLLVTGPNGSGKSSV
FRVLRGLWPIVSGRLSKPSRHINGDSESGCGIFYVPQQPYTCFGTLRDQIIYPLSHDEAV
QMTLKLHREDKISDDTTEILDARLKAILENVRLNYLLERDEGGWDANLNWEDILSLGEQQ
RLGMARLFFHKPKFGILDECTNATSVDVEEQLYELAHDMNITVVTSSQRPALIPFHSLEL
RLTDGEGNWELRTIKQ
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcccttcaactgttgcaactaactaagcagggtcaaagtctccttgcctctaga
aggaaatctctactgcttgctactggcatcttagtagttggtgggactgctgcatatgtg
cagtcacgacatagcagtaaaaagcctgattcttttggttattccaatgggcttaaagac
aataatgacaaattggacaagcaggttacagatgaatattatttgaagaaaaccattcaa
aataaaggaagtttgaaaccacttcatgtgttagctgctgttcttttgtctgatatgggc
aaaatgggagcaagggacctcttcactatggtagccatagcagtgctgaggactgctttg
agcaacagattagcaaaagtacagggatttctgttccgtgctgcttttctccgacgtgta
ccattatttttccggctgatatctgaaaacatcttattatgttttcttctatcagttatt
cattctacttcaaaatacgttactgggaccttaagtctgtgtttcagaaaaatattgaca
aaacatatccatgcaaattattttgagaacatggcgtactataggatgtcacatgttgat
tgtcggattactaatcctgagcaacgaattgcaagtgatgtgccaaggttctgttcagag
ttgagcgaattagtacaggatgacttgacagcagttactgacagtcttctctatacttgg
cgcctctgttcatatgctggcccaaaatatttcttttggatattggcctatgttgtggga
gcaggaactatgattagaaacttttctcctgcttttgggaaactgatgtcaaaagaacaa
cagttggaaggtgaatatcggcagcttcattcacgtttaagggcccatgcagaaagtata
gcattttatggtggagaatgtagagaagaatcacacattcagcagaagtttaaggatctt
gttaaacatatgagagttgcccttcatgaccattggtggtttggcatgattcaagacttc
ttgttgaagtatcttggtgctacagttgcagttatactgactatggagcccttttttgct
ggccctcttagacctgatacatcaactttgggaagggcaacaatgttaagcaacttaaga
tatcataccagcgtcataacgtcactatttcagtccttgggaactctttctagaagtgca
agacagcttaatcgtctcagtggttatgctggtcgcatttatgagttgatagtcgtatca
agagagctaaattctgatgatagagcttatctgcaaaaaattggaagtggcaactacttt
agtgaagctgaccatgttgagttttctggtgtcaaggttgtcaccccaactggtaatgtt
ttggtggaagatctgactctgaaggttgaatcaggatccaatctgttgattacaggtcca
aatggtagtgggaagagctcccttttccgagttctgggtggcctttggcccttgttatct
ggccatattgtaaaacctggtgttggttctgatcttaataaggagattttctatgtgcca
caaaggccatatacggttataggcacacttcgtgatcagttaatatatcctctcactgtg
gatcaagaggttgaaccactcacgcctactggaatgatggagctcttgaaaaatgttgat
ctcgagtatctattagaccgttatccagctgaacaggaggttaattggggtgaggaattg
tctttaggagagcaacaaaggttagggatggccagactgttctaccacaggcctaaattt
gcaattcttgatgagtgcaccagtgcagtgactactgacatggaggagcgcttttgcact
aaagttcgagctatgggaacttcatgcataaccatatcgcaccgtccagctttagttgca
tttcatgatgttgttttgtccttggatggagaaggaggctggcaagttagttacaaaaga
aaggattctagttccctgatgaccaatgtcaagaagactactgcgacagagcgtagaagt
gatgcagtggtagttcaacgtgcatttgccacaagtgataaggattctgcattctcaaag
tcaaaggcacaatcatatatttcagaggtgatagtggcatctcccagggcagatgctggt
cttcctttgccaatttttccacaactccaaagggcaccaagggtattggcattgagagta
gctgcaatgtttagaatactggcatcgactgttctggataaacaaggggcacatttactt
gcacttgcttttcttgttctttcaagaacatgggtcacagatcggattgcctcactgaat
ggaaccactttaaaatatgttttggagcaagataaaacatcctttattcaattaattggt
gttagtattcttcaaagtgctgcatcctcgtttattgcaccttcattgaggcacttgaaa
gccaggttggctcttggatggaggatttgtttgactcagcatctactaaagaaatacttg
agaaacaacgcattttacaaggtattccatatgttggggaaaaatattgatgctgatcag
agaatcactcatgatcttgaaaagctatccagagacttttctggactattaactggaatg
ataaagccatcagttgacatcttatggttcacctggagaatgaagctcttaatgggtcag
aaaggagttgccatattgtatgcttatatgctgcttggactgggttttttgagaactaca
actcccgactttggtgatcttacaagtcaagcacaacaacttgaaggaacttttaggttc
atacatgaaagactgcgtatgcatgctgagtctattgctttctttggaggtggcacacga
gaaaaagctatgatcgactcaagattcagggaactgcttgaccattctctgttacttcta
aagaagaaatggttatacggtatcctggatgattttgtcaccaagcaactcccacataat
gttacttggggcttgagcttgttgtatgctatggaacacaagggagaccgagctttgacc
tcaaatcaagcggagctggcacatgcattgcgtttcttagcctctgtcgtttcacagagc
tttttagcctttggggacattcttgaactgcataagaagttccttgagctttctggtggt
gtaaatagactttttgagcttgaagagattctagatgctgctcagtttggggattggcca
actgataaactgtccccgtctaaggagaatgatgttgatgcaaaagatttcatttccttt
acggaggttgatatcatttccccagcacagaaattgttggcaaagcagttgacgtttgac
atagtacaaggaaaaagcttgcttgtcacaggtccaaatggaagtgggaaaagttccgtt
ttcagagtccttagaggtctttggcccattgtgagtggtagactttccaaaccatcacga
catattaatggagatagtgaatctggttgtggcatcttctatgttcctcaacagccatac
acatgctttggaaccttgagagatcaaatcatatatcctctctctcatgatgaggcagta
cagatgacattaaagctacatcgtgaagataaaatatctgatgacaccacagaaattctg
gatgcacgtttgaaagctattctggagaatgttagactaaattatcttctggaaagggac
gaaggtggctgggatgctaatctgaattgggaagacattctttctcttggagaacaacag
agattaggcatggctcgcctcttctttcacaagcctaaatttggcattcttgatgagtgt
acgaatgccacgagcgttgatgttgaggaacaactttatgagcttgctcatgatatgaac
atcacagttgtgacatcctcacagcgtcctgcgctaataccattccattctttggaatta
cggcttactgacggtgagggtaactgggagcttcggacgataaagcaatga
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