KEGG   Manihot esculenta (cassava): 110628104
Entry
110628104         CDS       T05761                                 
Name
(RefSeq) DNA polymerase alpha subunit B isoform X1
  KO
K02321  DNA polymerase alpha subunit B
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110628104
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mesc03032]
    110628104
DNA replication proteins [BR:mesc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    110628104
SSDB
Motif
Pfam: DNA_pol_E_B Pol_alpha_B_N CDC48_N PfEMP1_CIDRalpha1_dom
Other DBs
NCBI-GeneID: 110628104
NCBI-ProteinID: XP_021630290
LinkDB
Position
12:complement(1451460..1457844)
AA seq 621 aa
MEVEIKEEFHKIGFMLDNEEEILKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVQN
SEMDGFLLHLQTEQKEAVLREEHNLHVYSSKDVDMILNDEEEDLKEVIPGTPTDKTLRLD
SEPFDSTVKSNANGYSSGKPSKHVTPFGLRTDKFVVKFNINNLPDTENGDTEHANENLED
DIIKRVHPAKKCSLVFHGSGPEPGCRFMYDRIEDRFNALENRIRRHAAVLSSSGLYEEPM
DPTIASQRNVFAVGMICCDGEGHLNEKSILLQSSVEHSGGQCVRLDLHNLSQFSIFPGQI
VGVEGHNPSGHCLIASKVVDYVPLLASPDEDLHPAKKQAVDQEIQATESTYTQGEISTLI
ASGPFTTTDNLLFEPLTELLAYATRKLPQLLILLGPFVDSEHPEIKKGTVDRSFDEIFHM
EILRRLQDYVEYSGPEAQVLIVPSTRDAHHDFVFPQPAFEIHPPSLKHQITSLRNPGVFS
ANQVRVGCCTADILRQLSGEELSRNPKDGTPIDRMSRLASHILSQCSFYPLYPPAEDIPL
DFSLASEALHISSIPEILILPSDMKYFIKVLYLSGGSEGEEHMKCICINPGRLAKGEGGG
TFVELNYQGSADRMNASVIGI
NT seq 1866 nt   +upstreamnt  +downstreamnt
atggaagtggagattaaagaagaattccacaaaattggattcatgctagacaacgaagaa
gaaattctcaagaaatgccttacattctgtataaattacaatctcaagccatcagatctt
gtttctagctgggaggtttactatcttaacaggcaattagatgaatcaacggtgcaaaat
tctgaaatggatggatttttattgcacttgcagactgaacagaaagaagcagttcttaga
gaggaacataatttgcacgtctactctagcaaagatgttgacatgattttgaacgatgag
gaggaagatttgaaagaagtaattcctggaactccaacagacaagactctaagacttgat
tcagaaccatttgattctacagtcaaatcaaatgcaaatggttattcctctggaaagcca
tcaaagcatgtgacaccctttggactacgaactgataagtttgtggtcaaattcaacatc
aataatctgcctgatacagagaatggtgacactgagcatgctaatgagaatcttgaggat
gatattatcaagagagtgcatcccgccaagaagtgttccttagtattccatggatctggg
ccggaaccaggttgcaggttcatgtatgacaggattgaagacaggtttaatgcacttgag
aaccgcatcagaaggcatgcagctgtgctttcttcttctggactctatgaggaaccaatg
gaccctacaattgcctcacagagaaatgtgtttgctgttggaatgatctgttgtgatgga
gaaggtcatttgaatgagaagtcaatcttgttgcaaagcagtgttgagcattctggagga
cagtgtgttcgtttggacttgcataacttgagccagttctccattttcccaggacagatt
gtaggtgttgaaggtcacaatcccagtggacattgtttaattgcttcaaaagtggtagat
tatgttcctttgttagcttctcctgatgaggatttgcaccctgcaaagaagcaagctgtg
gatcaggaaattcaagcaactgagtccacctatacacaaggagagatatcaacgcttatt
gcttctgggccttttaccacaacagacaacttattgtttgagcctctgacagaattgttg
gcatatgcaaccagaaagctaccacagttgcttatactcctgggaccatttgttgattct
gaacatccagagattaagaaaggaactgtagataggagctttgatgagatatttcatatg
gagattctcagaaggttgcaagactacgtggaatattcaggccccgaagcacaagtgtta
attgtgccatctacacgggatgctcaccatgattttgttttccctcagcctgcttttgaa
attcatccacccagtcttaaacatcagataaccagtctcaggaatccaggagtattttca
gcaaatcaggtcagagtaggttgctgcactgcagatattctgagacagcttagtggagag
gagttgtcacgaaatccaaaagatggaacaccaattgatcgaatgagtagacttgcaagc
catattcttagccagtgcagcttttatccattatatccaccagcagaagatattccactg
gatttttcgcttgcttcagaagcacttcatatctcctcaattcctgaaattcttatccta
ccttcagacatgaaatactttataaaggtactgtacctgagtggaggaagtgaaggagaa
gagcatatgaaatgcatttgtataaacccaggaagattggccaagggagaaggtgggggc
acttttgtagagcttaattaccaagggagtgctgacaggatgaatgcttctgtcataggc
atatga

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