Manihot esculenta (cassava): 122722215
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Entry
122722215 CDS
T05761
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Module
mesc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122722215
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
122722215
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122722215
NCBI-ProteinID:
XP_043808333
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Position
17:8067277..8068738
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AA seq
390 aa
AA seq
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MGSKVHACAAYLVLLFAFTSGAQPNTFDVTKYGAKEGSDITKALLSAWKGACGAAGSGKV
VIPKGKYSLGVVDLLGPCKGAMHLQVEGTLVAPAKASQHRKNSWVTLRYLDRLTVSGGGA
FDGQGEIAWQRESCGGGCKKALPVNLRFDFVTNSIVEDVTSIDSKQFHVNLLGSKNLTFQ
RFSVKAPGHSPNTDGIHIGRSEEINIIDSNIMTGDDCISIGRGSRQVRITNVRCGHGHGI
SIGSLGKYEKEEPVSGIYVKNCTIYDTDNGVRIKTWPALHGGSVSNIQFEDIVMQNVSNP
IIIDQMYCPHNECNRKMPSKVKISDVIFKNIRGSSRTPTAVQLTCSSSVPCKNVELSNVN
LQYTGSKGPAKSICTNVKPKIIGKLIPRGC
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaaggtacatgcgtgcgcagcatatttggtgttactgttcgcctttaccagc
ggagctcagcccaatacctttgatgtcacaaaatatggtgcgaaggaggggtcggatatc
actaaggctttactgagtgcgtggaagggggcttgtggagcagcgggttccggcaaagtc
gtgataccaaaagggaagtactcattaggcgtggtggatttgctaggcccttgcaagggt
gccatgcatcttcaagtggaaggaacgttggtggcgccagcaaaagctagccagcaccgc
aagaatagctgggttacattgagatacctggaccgattaacggtatccggtggtggggcc
ttcgacggacaaggagaaattgcttggcagcgggagagctgtggcggcggatgcaagaaa
gcacttccagttaacctaaggtttgacttcgtcaccaacagcatagtcgaggacgtgaca
tccatagatagcaagcagttccacgtcaatctcctcggcagcaaaaaccttaccttccag
cgattttcggtgaaagcgccggggcatagtcccaacacggatggaattcacattggacgg
tcggaggagatcaacattattgattcaaacattatgaccggtgatgattgcatctccatt
ggccgggggagcaggcaagtacgaatcacaaacgtaaggtgcggacacgggcatggcatt
agtattggaagtttaggaaagtacgagaaggaagaacctgtgtctggaatttatgtgaag
aattgcacaatatacgacaccgacaatggcgtgagaattaagacttggcccgcattgcat
ggtggcagtgtgtcgaatatccagttcgaggatatcgtcatgcaaaacgtcagcaatccc
atcattatagatcaaatgtactgcccgcataacgaatgcaatcgcaagatgccatcaaaa
gttaaaataagcgacgtcatcttcaagaatattcgaggatcgtcaagaacgcccacagcc
gttcaattgacatgcagcagcagcgtaccatgcaagaacgttgaactttctaacgttaac
ctccagtacaccggatctaagggtcctgcaaaatctatttgtacaaatgttaagcctaag
attataggaaagttgattccgagaggatgttaa
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