Manihot esculenta (cassava): 122724001
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Entry
122724001 CDS
T05761
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Module
mesc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122724001
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
122724001
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GFIT
Motif
Pfam:
Glyco_hydro_28
NosD
Beta_helix
DUF2861
Motif
Other DBs
NCBI-GeneID:
122724001
NCBI-ProteinID:
XP_043814086
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Position
7:24639575..24641940
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AA seq
332 aa
AA seq
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MGSKAHVCTVYLLLLFAFTSEALPNTFDVTKYGAKAGSDITKALLSAWERGMCSSGFRQS
RGTKRKYFLGVVDLIALARNLRFDFVTNSIVEDVTSIDSKQFHVNVLGSKNLTFQRFSVK
APGHSLNTDGIHIGRSEGINIINSNIVTGDDCISIGQGSKQVRITNVRCGHGHGISVGSL
GKYEKEEPVSGIYVKNCTIYDTDNGVRIKTWPALYGGIASNIHFEDIVMQNVSNPIIIDQ
MYCPWNLCNRKKPSKVQISDVSFKNIQGSSRTPTAVQITCSSSVPCKDIVLSNVNLKYTG
SKGSAKSKTVRMHAREKELRVRQHRSFRVQHD
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaaggcacatgtatgcacagtatacctgttgttgctgtttgcttttaccagc
gaagctctgcccaatacctttgatgtcacgaaatatggtgccaaggcaggatcggatatc
actaaggctttattgagtgcgtgggaaagagggatgtgcagcagcgggttccggcaaagt
cgtggtaccaaaaggaagtactttttaggcgtggtggatttgatagcccttgcaaggaac
ctacggtttgacttcgtcaccaacagcatagttgaggacgtaacttccatcgatagcaag
cagttccacgtcaatgtcctcggcagcaaaaacctcaccttccagcggttttcagtgaaa
gccccgggacatagtctcaacaccgatggaattcacattggacgatcggaggggatcaac
ataattaattcaaacattgtcaccggtgatgattgcatctccattggccaggggagcaag
caagtacgaatcacaaatgtaaggtgcggacacgggcatggcattagtgttggaagctta
ggaaagtacgagaaggaagaacctgtgtccggaatttatgtaaagaattgcacaatatac
gacactgacaatggcgtgagaattaagacttggcccgcattgtatggtggcattgcgtcg
aatatccatttcgaggacatcgtcatgcagaacgtcagcaatcccatcattatagatcaa
atgtactgcccatggaacctatgcaatcggaagaagccatcaaaagttcaaatcagcgac
gtcagcttcaagaatattcaaggatcgtcaagaacgcccacggccgttcaaattacgtgc
agcagcagcgtaccatgcaaggacattgtgctttctaacgttaacctcaagtacaccgga
tctaagggatctgcaaaatctaaaacagtgcgtatgcacgcgcgagaaaaggaattgcgg
gtgcggcaacaccgatccttccgcgtccaacacgactag
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