Methylobacterium sp. AMS5: Y590_03965
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Entry
Y590_03965 CDS
T04283
Name
(GenBank) amino acid decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
meta
Methylobacterium sp. AMS5
Pathway
meta00330
Arginine and proline metabolism
meta00480
Glutathione metabolism
meta01100
Metabolic pathways
meta01110
Biosynthesis of secondary metabolites
meta04148
Efferocytosis
Module
meta_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
meta00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Y590_03965
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Y590_03965
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Y590_03965
Enzymes [BR:
meta01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Y590_03965
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Ribosomal_L27e
Motif
Other DBs
NCBI-ProteinID:
AMB44040
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All DBs
Position
complement(799842..802187)
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AA seq
781 aa
AA seq
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MDFHRRFTVLMCTPAFDPDDLEGARVDQIVAAVEKRGFEVVRARRVEDASIAVQTDSAVG
CLVVDWGKRGLEGKAAALIDMMRKRGLEMPIVIMVRRKRLEDIPVELLDFIDGYIFLAEE
TPEFIARGLVSRVTQYADTLKTPFFGALVDYAEEGNQLWTCPGHNGGIFYNRSPIGRIFV
EHLGEAIFRDDLDNSVLDLGDLLTHEGPALKAQKEAAKIFGAEKTYFVLNGTSASNKVVL
GSLVAEDDLVLFDRNNHKAAHHGALLLAGGIPIFLETDRNAYGLIGPIYHEALDEGRIRE
KIRDNPLVKDKEAWRRERPFRCAVIEQCTYDGTIYDAQAIVERIGHLCDYILFDEAWAGF
MKFHPLYHRRFAMGLTGLDETSPGIIATQSTHKQLASFSQASQIHTRDGHIRGQTRRVEH
KRLNESFLVHASTSPFYPIFASLDVGAQMMKGRSGVVLWDDTIRLGIEWRKKARAIRKEF
EEREADPKRRWFFDPFVPDVVKGPDGTEIPWESVPTDALAADARYWELTPGAAWHGFTHV
APGFAITDPNKLTVLTPGFDRKTGAYTEHGVPAPIVAQYLRENRIVPEKNDLNSLLFLLT
PGVESSKAGTLISGLVAFKRLHDDNVPLEEAMPEFVARRPKRYRGVRLRDLCADYHAFHR
ESGTSALQRKQFMPEHLPEMVMAPKAAAQMLTRNRVDYVPIAEAEGRIATTLMLVYPPGI
GTVLPGERLDARAKPMLDYFKMFEAAANLFPGFEAEIQGVYRESDPDGRIRFHTYVLREG
A
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggattttcaccgccgtttcaccgtgctgatgtgcacgcccgccttcgatccggatgat
ctggagggcgcgcgcgtcgatcagatcgtcgcggcggtggagaagcgcggcttcgaggtg
gtgcgggcgcggcgcgtcgaggatgcctcgatcgcggtgcagaccgattcggccgtcggc
tgcctcgtggtggattggggcaagcgcggactcgagggcaaggcggccgcgctcatcgac
atgatgcgcaagcgcggcctggagatgccgatcgtcatcatggtccgccgcaagcggctg
gaggacatccccgtcgagctgctcgacttcatcgacggctacatcttcctcgccgaggag
acgcccgaattcatcgcccgcggcctcgtctcccgcgtgacgcagtatgccgacacgctg
aagacgccgtttttcggcgcgctcgtcgattacgccgaggagggcaaccagctctggacc
tgccccggccataacggcggcatcttctacaaccgctcgcccatcggccgcatcttcgtg
gagcatctcggcgaggcgatctttcgcgatgacctcgacaactcggtgctcgatctcggt
gacctgctgacccacgaggggcccgcgctcaaggcgcagaaggaggccgcgaagatcttc
ggggcggagaagacctatttcgtcctcaacggcacctcggcctccaacaaggtggtgctg
ggctcgctggtggccgaggacgacctcgtcctgttcgaccgcaacaaccacaaggccgcc
catcacggcgcgctgctgctggccggcggcatcccgatcttcctcgagacggaccgcaat
gcttacggtttgatcgggccgatctatcacgaggcgctcgacgaggggcgcatccgcgaa
aaaatccgcgacaacccgctcgtgaaggacaaggaagcgtggcgccgcgagcgaccgttc
cgctgcgccgtgatcgagcaatgcacctatgacggcacgatctacgacgcgcaggcgatc
gtcgagcgcatcggccatctgtgcgactacatcctgttcgacgaggcctgggcgggcttc
atgaagttccatccgctctaccatcgccgcttcgccatgggcctgaccgggctcgacgag
acgtcgccgggcatcatcgccacgcaatcgacccacaagcagctcgccagcttctcccag
gcctcccagatccacacccgcgacgggcacatccgcggccagacccggcgggtcgagcac
aagcgcctgaacgagagcttcctcgtccacgcctcgacctcgccgttctacccgatcttc
gcctcgctcgatgtcggcgcgcagatgatgaagggccgctccggcgtcgtgctgtgggac
gacacgatccgcctcggcatcgagtggcgcaagaaggcccgcgccatccgcaaggagttc
gaggagcgcgaggccgacccgaagcggcgctggttcttcgaccccttcgtgcccgacgtg
gtgaaggggcccgacggcacggagatcccgtgggagtccgtgccgaccgacgctctggcc
gccgacgcccgctactgggagctgacgccgggcgcggcgtggcacggcttcacccatgtc
gcgccgggctttgccatcaccgaccccaacaagctcaccgtgctcacccccggcttcgac
cggaagacgggggcctataccgagcacggcgtgccggcgccgatcgtcgcgcaatacctg
cgcgagaaccggatcgtgccggagaagaacgacctcaactcgctgctcttcctgctgacg
ccgggcgtcgaatcgtcgaaggcgggcacgctcatctccggcctcgtcgccttcaagcgg
ctgcacgacgacaacgtgccgctcgaagaggcgatgccggaattcgtcgcacgccggccc
aagcgctaccgcggcgtgcgcctgcgcgacctctgcgccgattaccacgccttccatcgc
gagtcgggcacctcggcgctccagcgcaagcagttcatgcccgagcacctgccggagatg
gtgatggcgcccaaggccgccgcgcagatgctcacccgcaaccgggtcgattacgtgccg
atcgcggaggccgaggggcgcatcgccacgaccctgatgctggtctatccgcccggcatc
ggcaccgtgctgcccggcgagcgcctcgacgcgcgggccaagccgatgctcgactatttc
aagatgttcgaggcggccgccaacctgttccccggcttcgaggccgagatccagggcgtc
taccgcgagagcgacccggacgggcgcatccgcttccacacctacgtcctgcgcgagggc
gcctga
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