Methanothermobacter sp. EMTCatA1: tca_01013
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Entry
tca_01013 CDS
T05328
Symbol
rpoB_1
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
mete
Methanothermobacter sp. EMTCatA1
Pathway
mete03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mete00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
tca_01013 (rpoB_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mete03021
]
tca_01013 (rpoB_1)
Enzymes [BR:
mete01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
tca_01013 (rpoB_1)
Transcription machinery [BR:
mete03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
tca_01013 (rpoB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
BAZ99074
UniProt:
A0A223ZEA6
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All DBs
Position
938146..939690
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AA seq
514 aa
AA seq
DB search
MKKSAWGLVDAFFDKYDLVDHHIHSYNDFVSNRIQEIIDTSEPIELEQGKYRVETGKVSI
EKPFIKEADGSKSKIYPTEARLRNLTYSAHMSLEMRLLKEGGPETEFEKVYIGELPVMLK
SEICHLHGLSRKELMEKGEDPADPGGYFIVNGSERSIVTMEEIAPNKIILERIGEEDENR
ARAIVTSIRSGFRARISLEYRKPRKTGVFLRISFPYVPGEIPLVILLRALGLATDQEIIT
SISDDFNYQMIAADDIQVSLDRLNLNKKEMEELDEEDRREYLIRSAIKYIGNRVAKGMTE
DYRIKRAEDVIDRYLLPHIGTEPEKRLEKATYLAEMTEMLLQVISGERRPHDKDHYTNKR
LRVSGDLMEDLLRVAFTSLSRDMSYQLERSLARGKEPSVKQAVRSDVLTENLKHAIATGN
WVGGRAGVSQLLDRTSYMGTLSHMRRVVSPLSRSQPHFEARDLHPTQFGKICPNETPEGP
NCGLVKNLALLAKISEGSDASEVEEVIKKMGVVN
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagtgcatggggattggtagacgcgttttttgataaatacgatctggtggac
caccacatccattcatacaacgacttcgtaagtaaccgcatacaggaaataatagataca
agcgaacccattgaactggaacagggaaaataccgggtcgaaacaggaaaggtgagcata
gagaagcccttcatcaaggaggctgacggctcaaagagcaagatatatcccacagaggcc
cggctaagaaacctcacctactcagcccacatgagcctggagatgagactcctcaaggag
gggggacctgaaacggaattcgaaaaggtatacatcggtgagctgccggtgatgctgaaa
tcggagatatgccacctccatggcctcagcaggaaggaactgatggagaagggagaggac
cccgcggaccctggaggctacttcattgttaatggatcagagaggtccatcgtcacgatg
gaggagatagctcccaacaagataatccttgaaagaatcggtgaagaggatgagaacaga
gcaagggcaatagtaacatccataaggagtggattcagggccagaatatccctggagtac
cgtaagccaaggaagaccggtgttttcctgagaatatccttcccctacgttccaggggaa
atcccgctcgtcatactcctcagggcccttggacttgcaactgaccaggaaatcatcacc
agcatatcagacgacttcaactaccagatgatagctgcagacgatatacaggtctccctc
gacaggctcaacctcaataaaaaggagatggaggaactcgatgaagaggaccggagagaa
tacctcataaggagcgccataaagtacatcggtaaccgcgtcgccaaggggatgaccgag
gactaccgtataaaaagggctgaagacgttatagaccgttacctcctgccccacatagga
acagaacccgaaaagaggctggaaaaggcaacataccttgccgagatgaccgagatgctc
cttcaggtcatatcaggggagcgcaggccacacgacaaggaccactacacaaacaagagg
ctcagggtttcaggcgacctcatggaggacctcctcagggtggccttcacaagcctgagc
agggatatgagctaccagctcgagaggagccttgccaggggtaaggaaccatccgtaaaa
caggctgtgagatccgacgtgctgacagagaacctcaagcacgccattgcaaccggtaac
tgggttggtggaagggcaggtgtgagccagctgctggaccggacaagttacatgggtaca
ctctcccacatgaggagagtcgtttcacccctcagcagaagccagccccacttcgaggca
agggaccttcaccccacacagttcggtaagatctgtccaaacgaaacccctgagggtcca
aactgtggtcttgttaagaacctcgccctgctggcaaagatatccgagggctcagatgcc
agtgaggttgaggaggtcattaaaaaaatgggggttgtgaactaa
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