Methanothermobacter sp. EMTCatA1: tca_01358
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Entry
tca_01358 CDS
T05328
Symbol
cpdA_3
Name
(GenBank) 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
mete
Methanothermobacter sp. EMTCatA1
Pathway
mete03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mete00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
tca_01358 (cpdA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mete03032
]
tca_01358 (cpdA_3)
Enzymes [BR:
mete01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
tca_01358 (cpdA_3)
DNA replication proteins [BR:
mete03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
tca_01358 (cpdA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
tRNA_anti-codon
Metallophos_2
HROB
CDC24_OB3
HIN
Motif
Other DBs
NCBI-ProteinID:
BAZ99407
UniProt:
A0A223YZ17
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All DBs
Position
1246436..1247884
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AA seq
482 aa
AA seq
DB search
MNEIIGKFAREGILIEDNAYFRLREMDDPASVSSELIVKIKSNGGKFTVLTSEMLDEFFE
IDNPAEIKARGPLMVPAERDFDFEVISDTSNRSYTSGEIGDMIAYFNSRYSSLKNLLSKR
PELKGHMPIADLRGGEDVVSIIGMVNDVRSTKNNHRIIELEDDTGEISVVVHNENHKLFE
KSEKIVRDEVVGVHGTKKGRFVVASEIFHPGVPRIQEKEMDFSVAFISDVHIGSQTFLED
AFMKFVKWINGDFGSEEQRSLAADVKYLVVAGDIVDGIGIYPGQEKELLIRDIHEQYEEA
ARLFGDIRSDIKIVMIPGNHDSSRIAEPQPAIPEEYAKSLYSIRNIEFLSNPSLVSLDGV
RTLIYHGRSFDDMAMSVNGLSHERSDLIMEELLEKRHLAPIYGERTPLASEIEDHLVIDE
VPHILHTGHVHINAYKKYKGVHLINSGTFQSQTEFQKIYNIVPTCGQVPVLNRGVMKLLE
FS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagataatcggaaaatttgcaagggaagggatcctcatagaggataatgcctac
ttccggctcagggaaatggatgatcctgcaagcgtgtcctcagaactcatagttaagata
aagagcaatggtggtaaattcactgttttaacctctgaaatgcttgatgaattctttgaa
atagataaccccgcggagataaaggccaggggtcctctcatggtcccggcagagagggac
ttcgattttgaggtgataagtgatacaagtaaccggtcctacaccagtggtgagataggg
gacatgatcgcatacttcaacagccgctacagcagcctgaagaaccttctcagtaagcgc
cctgaactgaagggtcatatgccaattgctgacctccggggaggagaggacgtcgtcagc
atcatagggatggtcaatgatgtgcggagcaccaagaacaatcacaggattattgaactt
gaggatgatacaggtgaaatcagtgttgttgtgcacaacgaaaaccataagctctttgag
aagtccgagaaaatcgtgagggatgaggttgtgggtgtccatggaaccaagaagggaagg
ttcgtggttgcctccgagatattccaccccggggtccccaggatacaggagaaggagatg
gacttctcagttgccttcatatcagatgttcatataggaagtcagaccttccttgaggat
gccttcatgaaatttgtgaaatggataaacggggatttcggttcagaggagcagcgaagc
cttgcagcggatgttaagtacctggtggttgcgggtgacatcgttgatggcattggaatc
taccctggacaggaaaaggaactccttataagggacatccatgaacagtatgaggaggct
gcaaggctgttcggtgatataaggagcgacataaagatcgttatgatcccgggaaaccac
gactcctcgaggatagcggagccccagccagcaatacccgaggaatatgcaaagtccctc
tacagtatcaggaacatagaatttctcagcaacccatcccttgtgagccttgacggtgtg
aggaccctcatataccatggccgtagctttgatgacatggccatgagtgtcaacgggctc
tcacatgaaaggtcagacctcataatggaggaactccttgagaagaggcaccttgcaccg
atatatggtgagagaacaccgctggcatctgagatagaggaccacctggtcatcgatgag
gtcccacacatactccacaccggccatgttcacataaatgcctacaaaaagtacaaggga
gtgcacctcataaattcagggaccttccagtcccagacagagttccagaagatctacaac
atcgtcccaacctgcggccaggtcccggtgcttaacaggggtgtgatgaaactccttgaa
ttcagctga
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