Methanothermobacter sp. KEPCO-1: FVF72_01920
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Entry
FVF72_01920 CDS
T06317
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
metk
Methanothermobacter sp. KEPCO-1
Pathway
metk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
metk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FVF72_01920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metk03021
]
FVF72_01920
Enzymes [BR:
metk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FVF72_01920
Transcription machinery [BR:
metk03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
FVF72_01920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Fer4_9
Fer4
Fer4_10
Fer4_16
Fer4_7
RNA_pol_L_2
Fer4_2
Fer4_4
Fer4_6
Fer4_8
HcgF
Motif
Other DBs
NCBI-ProteinID:
QEF94024
UniProt:
A0A5B9M481
LinkDB
All DBs
Position
complement(374420..375214)
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AA seq
264 aa
AA seq
DB search
MDIALKEKTDTEMVFVVTGVTVPFINAIRRICMMEVPKLAIEYVNMYRNDARMFDEVLAH
RLGLVPLKADPEFIEGLKMPEECGCDEYCSECSVSFTLKKKGPGVIYSRDLLSETPAVKP
VYSDIPLVKLGDEDELELEAVAQLGVGRDHAKWEPTTACAYKYYPMITFTEECDECLECV
DACPRGVLGGESGKPQVLDVENCSMCKSCVRACDKGAIIVGYEEGKFIFRIETDGSVDPK
DVLLRACDILRDKAERVITFCEGG
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggatattgctcttaaggaaaaaactgataccgaaatggtctttgtggtcactggcgta
accgttcccttcataaacgccataaggaggatctgcatgatggaggtccccaaactggca
attgagtacgttaacatgtacaggaacgacgccaggatgtttgatgaggtgcttgcccac
aggcttggactggtacccctcaaagctgaccctgaattcattgagggcctgaaaatgcct
gaggagtgtggctgtgatgaatactgctctgaatgcagtgtatctttcacactcaaaaag
aagggtcccggcgtaatctactccagggatcttctatcagagacacctgcagtcaaacct
gtatattctgatataccccttgtgaagctgggggatgaggatgagcttgaactggaggct
gttgcacagctcggtgtgggaagggatcatgccaagtgggagcctacaacagcatgtgca
tacaagtactatccaatgataacattcacagaggaatgcgatgagtgccttgaatgtgtg
gatgcatgtccaaggggagttcttggaggggaatcagggaaaccccaggtacttgatgtt
gaaaactgttcaatgtgcaagagctgtgtgagggcatgtgataaaggggccataattgtg
ggatatgaggaaggcaagttcatattcaggatagagaccgacggatcagttgaccctaag
gatgtccttcttagggcatgtgacatcctcagagacaaggcagaaagggtaataacattt
tgtgaaggaggctaa
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