Methanosarcina sp. MTP4: MSMTP_0009
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Entry
MSMTP_0009 CDS
T03850
Name
(GenBank) RNA ligase, family
KO
K07468
DNA/RNA ligase [EC:6.5.1.-]
Organism
metm
Methanosarcina sp. MTP4
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
MSMTP_0009
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Gene cluster
GFIT
Motif
Pfam:
Lig_C
RNA_ligase
DNA_ligase_A_M
Motif
Other DBs
NCBI-ProteinID:
AKB23478
UniProt:
A0A0E3L031
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Position
complement(8380..9603)
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AA seq
407 aa
AA seq
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MLRDNIFQARKQIDILMHTAGSSETVDAGFVGKLAGYLGFEEEKIRHLFEKKYLARNWGE
HEHLFRFDKEISHIERGTLFYEKDDSFEMVLGFPKIRRAMVLYPTLEKQFDGLRSVVVEE
KMNGYNVRVTGVNGEVLAITRSGYICPYTTEKARAKLNPDFFNDYPDLVLYGEMVGPDNP
YVPKEIYDVESVEFYIFDVRKKNTGDPLPAARRREILEKYGFLQVKSFGEISLETAPGEI
AKIIRNLGQIEHEGVVIKDPAMVLPSVKYTSSRSNCSDLRHAFKFYNESGRDYMLSRIVR
EGFQAVEWGESEAEFKKRCMQLGESILTPLRDSVQSVKERKRLYDEVRIRVKDLKTAVEF
EDYLKRLGVDSIFENPEPVGDEYRITIKKVNKSTNDKTEAIWKGELW
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgctaagggacaacatatttcaagcccgaaagcagatagatatacttatgcacactgcg
gggagtagtgaaactgttgatgccgggtttgtcggaaagctggccggatatctcgggttt
gaagaagaaaaaatacgccaccttttcgaaaaaaaataccttgcccggaactggggagag
cacgagcacctttttcgtttcgacaaggagatttcccatattgagaggggcacattgttt
tatgagaaagatgacagtttcgaaatggttctgggtttcccgaaaatacggagggctatg
gtactttatccaaccctcgaaaagcagttcgacggtctccggagcgttgtcgtggaagag
aagatgaacggttacaacgtccgtgttaccggagtgaacggagaggtccttgcaattacc
aggagcggatatatctgtccctatacaacggaaaaggccagggcgaaattaaacccggat
ttcttcaacgactatccggacctggtgctctacggggaaatggtggggccggacaaccct
tacgtccccaaagaaatctacgatgtcgagtccgtagagttttacatcttcgacgtccgg
aaaaaaaatactggagatcccctccctgcagcccgaaggcgggaaatcctggaaaaatat
ggctttttgcaggtgaagtctttcggggaaatttccctggaaacggctcccggggaaatt
gcaaaaataatccggaaccttggccaaatcgagcacgaaggagtggttattaaagacccg
gcaatggtcctgccctctgtgaagtacacctcttcccggagcaactgctctgacctcagg
catgccttcaagttctacaacgagtccggaagggactacatgctttcccggatcgtcagg
gaaggattccaggcagtggaatggggagaaagcgaagccgagttcaagaaacgctgcatg
cagcttggggaaagcatcctgacccctctccgggattccgtgcaaagcgtcaaagaacgg
aagcgcctctacgacgaggtccggatcagggtaaaggacctgaaaaccgccgtagaattc
gaagactacctgaaaaggctcggagtagattccatcttcgagaaccctgagcctgtaggg
gacgagtaccggataaccatcaaaaaagtaaacaagagcacgaacgacaaaaccgaggca
atctggaaaggggaactgtggtaa
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