Methanosarcina sp. MTP4: MSMTP_2443
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Entry
MSMTP_2443 CDS
T03850
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
metm
Methanosarcina sp. MTP4
Pathway
metm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSMTP_2443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metm03021
]
MSMTP_2443
Enzymes [BR:
metm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSMTP_2443
Transcription machinery [BR:
metm03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSMTP_2443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Fer4
Fer4_7
Fer4_9
Fer4_8
Fer4_10
Fer4_16
Fer4_21
Fer4_6
Fer4_2
VpsR
Motif
Other DBs
NCBI-ProteinID:
AKB25912
UniProt:
A0A0E3NYT9
LinkDB
All DBs
Position
complement(3205033..3205833)
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AA seq
266 aa
AA seq
DB search
MTMEVDILELSDRSAKFVLSKVGMAFANGIRRAMIADVPTLAIEYVNLYDNTSVLYDEQL
ALRLSLIPLVTDIETYVPQAECMVCGGEGCPACEVSLTLSSEGPAIVHSGDLISSDPLVQ
AADANISIVELKKGQKLVLEAIAHMGYGRDSVKWQAGIACGYKNMPIISVENCDACGHCA
AECPKSIIRIEESGAMVPEEDLLKCSLCRLCEKACDINAIKVNYDENAFVFTMESDGSYT
ARDLILHASDVVKGKAEGLISILDQL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggaagtagacattctggagttatcggacagatctgcaaagtttgtgctttca
aaggtcggcatggcttttgctaacggcatccggcgcgctatgatcgccgatgtccctacc
cttgcgatcgagtacgtaaatctctacgacaacacctccgtactctatgacgagcagctg
gctctccgtctgtccttaatcccgcttgtaacagacattgagacgtatgtgcctcaagcc
gagtgcatggtttgtggaggcgaaggctgccctgcctgtgaggtctcccttaccctgagt
tccgaaggtccggcgattgttcattccggagaccttatctcttccgaccctctggtgcag
gccgcagatgctaacatctcgatcgtcgagctgaagaagggacagaaactcgtgctcgag
gccatagctcatatgggctacggcagggatagcgtgaagtggcaggcgggcattgcatgc
ggctataaaaacatgccgattataagcgttgagaactgcgacgcttgcggacattgtgcg
gcggaatgccccaagagcatcatccggatcgaagaatccggggcaatggtccccgaagag
gatcttctcaagtgttctctttgcagactctgtgaaaaggcatgtgacatcaacgccatc
aaggtcaactacgatgaaaacgcttttgtctttaccatggaatccgatggttcctatacc
gccagagaccttatattgcacgcctctgatgtggttaaaggcaaagccgaaggactcatc
agtatcctggatcagctctga
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