Methanobacterium sp. MZ-A1: BK008_06600
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Entry
BK008_06600 CDS
T05317
Name
(GenBank) DNA-directed RNA polymerase subunit B''
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
metn
Methanobacterium sp. MZ-A1
Pathway
metn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
metn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BK008_06600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metn03021
]
BK008_06600
Enzymes [BR:
metn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BK008_06600
Transcription machinery [BR:
metn03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
BK008_06600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
DUF4431
Motif
Other DBs
NCBI-ProteinID:
AUB58015
UniProt:
A0A2H4VIU4
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All DBs
Position
1347601..1349091
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AA seq
496 aa
AA seq
DB search
MVKNAWGLVDTFFDEYKLVDHHIKSYNDFVDHRIQDIIDITEPIVLEQGEYCIQTGKVEI
RKPYIKEADGSKSKVFPTEARLRNLTYSAHMYMDMALSKGEEEPNLEKVYIGELPVMLKS
NICHLNGLGYNELEANGEDPQDPGGYFIVNGSERAIVTMEEIAPNKIILERIGEKDDRRA
RAIVTSIKSGFRARITLEYRKPRKKGVFLRISFPYVPGEIPLVVLLRALGLEKDVDLVSS
VSEENDVQFLLIDDIQTSEITNTYDAIKYIGNRVAKGMTEEYRIKRAEDVIDRYLLPHIG
VEPEKRAEKATYLAEMTEMLLQVIFDEREPHDKDHYANKRLRVSGDLMEDLFRVAFTSLT
RDMTYQLERSLARGKEPSVKQAVRSDVLTENIKHAIATGNWVGGRAGVSQLLDRTSYMGT
LSHLKRVVSPLSRSQPHFEARDLHPTQFGKICPNETPEGPNCGLVKNLAILAKISEGSNP
DELEAVVKKMKTINPI
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaaatgcctggggacttgtcgataccttttttgatgaatataaactggtggat
catcatattaagtcatacaacgactttgtagatcatcgtatacaggatataattgatata
accgagcccattgtattggagcaaggagaatactgcatacaaaccggtaaagttgaaatc
cggaagccttacattaaggaagctgatggctcaaaaagtaaggtcttccctactgaagct
agactcagaaatctaacttactcggcccatatgtacatggacatggctctatccaagggt
gaagaagaacctaacctggagaaagtctatattggtgaacttcctgtaatgcttaaatcc
aacatatgccaccttaatggattaggatataatgaactggaagccaatggtgaagatcct
caggatcccggaggctacttcattgtcaatggttccgaaagggccatagttaccatggaa
gagatagcacccaacaagatcatcctggaaagaattggggaaaaagacgaccgccgggca
cgagcaattgtaacctcgatcaaaagtggttttagagcacgaataactcttgaataccgt
aaaccaaggaaaaaaggcgtatttttaagaatatcattcccgtacgtacctggagaaata
ccactggtggttttactccgtgccctgggtctggaaaaagatgtagacctggttagcagt
gtttcagaagaaaacgacgtacaattccttctcatagatgacattcaaacctcagaaatc
actaacacctacgatgctatcaagtacatcggtaaccgggtggccaagggtatgactgag
gaataccgaattaaaagggcggaagatgtcatagaccgttacctattaccacacattggt
gtggaaccagaaaaaagagcagaaaaagccacatatctggctgaaatgacagagatgctc
ctgcaagttatttttgacgaacgtgaaccacacgacaaggaccactacgccaataagaga
ctccgggtatctggagacctcatggaagatctgttcagagttgcattcaccagtttaacc
cgtgacatgacctaccagttggaacgaagtctggcaaggggaaaagaaccctcagtcaaa
caggcagtgcggtccgatgtcctaactgaaaacatcaaacacgccatagccactggaaac
tgggttggtggacgggccggtgtaagccagttactggatagaaccagttacatgggaact
ctttcacatcttaaacgtgtagtttctcccctgtcacggagtcaacctcacttcgaagct
cgtgacctgcaccccactcagtttggaaaaatctgtcccaacgaaacccctgaagggccg
aactgtggactggtaaagaacctggcaattttggccaaaatatcagaaggttccaatcca
gatgaactggaagcagtggtaaaaaagatgaaaaccatcaaccctatctag
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